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04302015_13_scaffold_81

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_81_1
Curvibacter putative symbiont of Hydra magnipapillata, Curvibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(139..1299)
DNA (1161bp) protein (387aa)
Transposase insI for insertion sequence element IS30B/C/D n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YBZ5_9BURK rbh
Transposase insI for insertion sequence element IS30B/C/D {ECO:0000313|EMBL:CBA30177.1}; TaxID=667019 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Curvibacte
Fis family transcriptional regulator rbh
04302015_13_scaffold_81_2
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1461..4439)
DNA (2979bp) protein (993aa)
Uncharacterized protein n=1 Tax=Rhizobium fredii (strain HH103) RepID=G9A3A2_RHIFH rbh
DNA repair protein {ECO:0000313|EMBL:GAO24302.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.
hypothetical protein
04302015_13_scaffold_81_3
unknown

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5035..5634
DNA (600bp) protein (200aa)

This feature has no annotations

04302015_13_scaffold_81_4
unknown

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5631..5738
DNA (108bp) protein (36aa)

This feature has no annotations

04302015_13_scaffold_81_5
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5731..5943
DNA (213bp) protein (71aa)
Phage transcriptional regulator, AlpA n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X2P9_THIK1
Phage transcriptional regulator, AlpA {ECO:0000313|EMBL:BAP88316.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium GJ-E10.;"
phage transcriptional regulator, AlpA
04302015_13_scaffold_81_6
unknown

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6099..6440
DNA (342bp) protein (114aa)
phage transcriptional regulator AlpA
04302015_13_scaffold_81_7

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6442..7320
DNA (879bp) protein (293aa)
Putative nucleoside triphosphate hydrolase n=1 Tax=mine drainage metagenome RepID=E6PSI5_9ZZZZ rbh
Putative nucleoside triphosphate hydrolase {ECO:0000313|EMBL:CBH97892.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative DNA helicase; K07505 hypothetical protein
04302015_13_scaffold_81_8
Geobacter sulfurreducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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7487..8797
DNA (1311bp) protein (437aa)
Uncharacterized protein {ECO:0000313|EMBL:AJY71110.1}; TaxID=35554 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter sulfurredu
04302015_13_scaffold_81_9
Burkholderia pseudomallei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8981..10201
DNA (1221bp) protein (407aa)
Prophage integrase n=2 Tax=Burkholderia pseudomallei RepID=I1WEV5_BURPE rbh
prophage integrase rbh
Prophage integrase {ECO:0000313|EMBL:CAH34115.1}; TaxID=272560 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; pseudomallei group.;" source="Bur
04302015_13_scaffold_81_trna_2
unknown

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comp(10140..10212)
DNA (73bp)
transferRNA
04302015_13_scaffold_81_10

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comp(10274..12208)
DNA (1935bp) protein (645aa)
Putative Peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) PpiD {ECO:0000313|EMBL:CBH96297.1}; EC=5.2.1.8 {ECO:0000313|EMBL:CBH96297.1};; TaxID=410659 species="unclassified sequences; meta
PpiC-type peptidyl-prolyl cis-trans isomerase; K03770 peptidyl-prolyl cis-trans isomerase D [EC:5.2.1.8]
Putative Peptidyl-prolyl cis-trans isomerase D (PPIase D) (Rotamase D) PpiD n=1 Tax=mine drainage metagenome RepID=E6PMZ5_9ZZZZ rbh
04302015_13_scaffold_81_trna_1
unknown

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comp(12336..12408)
DNA (73bp)
transferRNA
04302015_13_scaffold_81_11

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comp(12445..12717)
DNA (273bp) protein (91aa)
transcriptional regulator n=1 Tax=Thiomonas sp. FB-6 RepID=UPI00036B58A6 rbh
DNA-binding protein HU-beta (NS1) (HU-1) {ECO:0000313|EMBL:CBH96296.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
histone family protein DNA-binding protein; K03530 DNA-binding protein HU-beta
04302015_13_scaffold_81_12

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comp(12900..14003)
DNA (1104bp) protein (368aa)
Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase (Decarboxylating)) {ECO:0000313|EMBL:CBH96294.1}; EC=1.1.1.83 {ECO:0000313|EMBL:CBH96294.1};; EC=1.1.1.93 {ECO:0000313|EMBL:CBH96294.
Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase [decarboxylating]) (EC:1.1.1.83 1.1.1.93 4.1.1.73)
Tartrate dehydrogenase/decarboxylase (TDH) (D-malate dehydrogenase (Decarboxylating)) n=1 Tax=mine drainage metagenome RepID=E6PMZ2_9ZZZZ rbh
04302015_13_scaffold_81_13

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comp(14021..15016)
DNA (996bp) protein (332aa)
Putative Permease of the drug/metabolite transporter (DMT) superfamily n=1 Tax=mine drainage metagenome RepID=E6PMZ1_9ZZZZ rbh
Putative Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:CBH96293.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine
putative Permease of the drug/metabolite transporter (DMT) superfamily
04302015_13_scaffold_81_14

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comp(15013..15579)
DNA (567bp) protein (189aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) {ECO:0000313|EMBL:CBH96292.1}; EC=2.7.8.5 {ECO:0000313|EMBL:CBH96292.1};; TaxI
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) n=1 Tax=mine drainage metagenome RepID=E6PMZ0_9ZZZZ rbh
04302015_13_scaffold_81_15
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(15672..17666)
DNA (1995bp) protein (665aa)
UvrABC system protein C n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5WZT2_THIK1
excinuclease ABC subunit C; K03703 excinuclease ABC subunit C
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
04302015_13_scaffold_81_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(17663..18268)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003627FBE rbh
uracil-DNA glycosylase
Uracil-DNA glycosylase superfamily {ECO:0000313|EMBL:ADG30497.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain
04302015_13_scaffold_81_17
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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18356..19513
DNA (1158bp) protein (386aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003815474 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAZ88085.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22
04302015_13_scaffold_81_18
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19583..20137
DNA (555bp) protein (185aa)
Elongation factor P n=2 Tax=Thiomonas RepID=D5WZS9_THIK1
translation elongation factor P; K02356 elongation factor P
Elongation factor P {ECO:0000256|HAMAP-Rule:MF_00141}; Short=EF-P {ECO:0000256|HAMAP-Rule:MF_00141};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;"
04302015_13_scaffold_81_19

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comp(20214..21599)
DNA (1386bp) protein (462aa)
Putative amidase {ECO:0000313|EMBL:CBH95310.1}; EC=3.5.1.4 {ECO:0000313|EMBL:CBH95310.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage me
Putative amidase n=1 Tax=mine drainage metagenome RepID=E6PK59_9ZZZZ rbh
amidase
04302015_13_scaffold_81_20

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comp(21759..22742)
DNA (984bp) protein (328aa)
Putative ABC transporter, periplasmic protein n=1 Tax=mine drainage metagenome RepID=E6PK58_9ZZZZ rbh
Putative ABC transporter, periplasmic protein {ECO:0000313|EMBL:CBH95309.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
NMT1/THI5 like domain-containing protein; K02051 NitT/TauT family transport system substrate-binding protein
04302015_13_scaffold_81_21

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comp(22777..23634)
DNA (858bp) protein (286aa)
Putative permease of ABC transporter n=1 Tax=mine drainage metagenome RepID=E6PK57_9ZZZZ rbh
Putative permease of ABC transporter {ECO:0000313|EMBL:CBH95308.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter permease; K02050 NitT/TauT family transport system permease protein
04302015_13_scaffold_81_22

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comp(23637..24419)
DNA (783bp) protein (261aa)
Putative ABC transporter component,ATP-binding n=1 Tax=mine drainage metagenome RepID=E6PK56_9ZZZZ rbh
Putative ABC transporter component,ATP-binding {ECO:0000313|EMBL:CBH95307.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
ABC transporter-like protein; K02049 NitT/TauT family transport system ATP-binding protein
04302015_13_scaffold_81_23

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comp(24577..25338)
DNA (762bp) protein (254aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=mine drainage metagenome RepID=E6PK55_9ZZZZ rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:CBH95306.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
short-chain dehydrogenase/reductase SDR rbh
04302015_13_scaffold_81_24
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(25363..26355)
DNA (993bp) protein (331aa)
Acetamidase/Formamidase {ECO:0000313|EMBL:CDW94507.1}; EC=3.5.1.49 {ECO:0000313|EMBL:CDW94507.1};; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" sou
Acetamidase/Formamidase n=1 Tax=mine drainage metagenome RepID=E6PK54_9ZZZZ rbh
Acetamidase/Formamidase rbh
04302015_13_scaffold_81_25

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comp(26423..27121)
DNA (699bp) protein (233aa)
Putative branched-chain amino acid transport protein (ABC superfamily, ATP_bind) n=1 Tax=mine drainage metagenome RepID=E6PK53_9ZZZZ rbh
Putative branched-chain amino acid transport protein (ABC superfamily, ATP_bind) {ECO:0000313|EMBL:CBH95304.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" sou
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
04302015_13_scaffold_81_26

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comp(27124..27870)
DNA (747bp) protein (249aa)
urea ABC transporter ATP-binding protein UrtD (EC:3.6.3.25); K01995 branched-chain amino acid transport system ATP-binding protein
Putative ABC-type transport system, ATPase component n=1 Tax=mine drainage metagenome RepID=E6PK52_9ZZZZ rbh
Putative ABC-type transport system, ATPase component {ECO:0000313|EMBL:CBH95303.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenom
Displaying 28 items

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