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04302015_13_scaffold_236

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_236_trna_1
unknown

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10..83
DNA (74bp)
transferRNA
04302015_13_scaffold_236_1

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comp(258..797)
DNA (540bp) protein (180aa)
Putative Hemerythrin n=1 Tax=mine drainage metagenome RepID=E6PQN4_9ZZZZ rbh
Putative Hemerythrin {ECO:0000313|EMBL:CBH97239.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
conserved hypothetical protein Hemerythrin-like protein
04302015_13_scaffold_236_2
unknown

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940..1131
DNA (192bp) protein (64aa)

This feature has no annotations

04302015_13_scaffold_236_3

Not on your lists

1128..2075
DNA (948bp) protein (316aa)
Putative DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:CBH97236.1}; EC=3.2.2.21 {ECO:0000313|EMBL:CBH97236.1};; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes
HhH-GPD family protein; K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
Putative DNA-3-methyladenine glycosylase II n=1 Tax=mine drainage metagenome RepID=E6PQN1_9ZZZZ rbh
04302015_13_scaffold_236_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2078..2482
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5B4_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31807.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiob
04302015_13_scaffold_236_5

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comp(2490..2930)
DNA (441bp) protein (147aa)
Putative Transcriptional regulator n=1 Tax=mine drainage metagenome RepID=E6PQM9_9ZZZZ
Putative Transcriptional regulator {ECO:0000313|EMBL:CBH97234.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
BadM/Rrf2 family transcriptional regulator; K13771 Rrf2 family transcriptional regulator, nitric oxide-sensitive transcriptional repressor
04302015_13_scaffold_236_6

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3057..3746
DNA (690bp) protein (230aa)
Regulator of cell morphogenesis and NO signaling (RCMNS) n=1 Tax=mine drainage metagenome RepID=E6PQM8_9ZZZZ rbh
Regulator of cell morphogenesis and NO signaling (RCMNS) {ECO:0000313|EMBL:CBH97233.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metag
ytfE; Regulator of cell morphogenesis and NO signaling (RCMNS)
04302015_13_scaffold_236_7

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3801..4085
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PQM7_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:CBH97232.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hypothetical protein
04302015_13_scaffold_236_8
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4148..4708)
DNA (561bp) protein (187aa)
Putative metal-sulfur cluster biosynthetic enzyme n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLN9_THIA3
putative metal-sulfur cluster biosynthetic enzyme
Putative metal-sulfur cluster biosynthetic enzyme {ECO:0000313|EMBL:CAZ89467.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas ars
04302015_13_scaffold_236_9
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4705..5208)
DNA (504bp) protein (168aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5B9_THIK1 rbh
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:ADG31812.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedi
04302015_13_scaffold_236_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5228..6478)
DNA (1251bp) protein (417aa)
sufS; Cysteine desulfurase (Selenocysteine lyase) (Selenocysteine reductase) (Selenocysteine beta-lyase) (SCL) (EC:4.4.1.16)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=554131 species="Bacteria; Proteob
Cysteine desulfurase n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLP1_THIA3
04302015_13_scaffold_236_11
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6475..7794)
DNA (1320bp) protein (440aa)
FeS assembly protein SufD n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5C1_THIK1
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD
FeS assembly protein SufD {ECO:0000313|EMBL:ADG31814.1}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thi
04302015_13_scaffold_236_12
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7797..8609)
DNA (813bp) protein (271aa)
FeS assembly ATPase SufC n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X5C2_THIK1 rbh
Component of SufBCD complex, ATP-binding component of ABC superfamily {ECO:0000313|EMBL:CDW94472.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" s
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein
04302015_13_scaffold_236_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8632..10077)
DNA (1446bp) protein (482aa)
Protein sufB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLP4_THIA3
sufB; Protein sufB
Protein sufB {ECO:0000313|EMBL:CAZ89472.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP 1
04302015_13_scaffold_236_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10445..10798
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI000376EDC6 rbh
flagellar biosynthetic protein FliO; K02418 flagellar protein FliO/FliZ
Flagellar biosynthetic protein FliO {ECO:0000313|EMBL:ADG30542.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas
04302015_13_scaffold_236_15

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10795..11547
DNA (753bp) protein (251aa)
Flagellar biosynthetic protein FliP n=1 Tax=mine drainage metagenome RepID=E6PJW5_9ZZZZ rbh
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:CBH95193.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fliP; Flagellar biosynthetic protein FliP
04302015_13_scaffold_236_16

Not on your lists

11560..11835
DNA (276bp) protein (92aa)
Flagellar biosynthetis protein FliQ n=1 Tax=mine drainage metagenome RepID=E6PJW4_9ZZZZ rbh
Flagellar biosynthetis protein FliQ {ECO:0000313|EMBL:CBH95192.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
flagellar biosynthetic protein FliQ; K02420 flagellar biosynthetic protein FliQ
04302015_13_scaffold_236_17

Not on your lists

11832..12623
DNA (792bp) protein (264aa)
Putative Flagellar biosynthetic protein FliR n=1 Tax=mine drainage metagenome RepID=E6PJW3_9ZZZZ rbh
Putative Flagellar biosynthetic protein FliR {ECO:0000313|EMBL:CBH95191.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
fliR; Flagellar biosynthetic protein FliR
04302015_13_scaffold_236_18

Not on your lists

12636..13778
DNA (1143bp) protein (381aa)
Putative Flagellar biosynthetic protein FlhB n=1 Tax=mine drainage metagenome RepID=E6PJW2_9ZZZZ rbh
Putative Flagellar biosynthetic protein FlhB {ECO:0000313|EMBL:CBH95190.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB
04302015_13_scaffold_236_19

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13805..15880
DNA (2076bp) protein (692aa)
Flagellar biosynthesis protein F lhA n=1 Tax=mine drainage metagenome RepID=E6PJW1_9ZZZZ rbh
Flagellar biosynthesis protein F lhA {ECO:0000313|EMBL:CBH95189.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
flhA; Flagellar biosynthesis protein flhA
04302015_13_scaffold_236_20

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15884..16033
DNA (150bp) protein (50aa)
Putative Flagellar GTP-binding protein n=1 Tax=mine drainage metagenome RepID=E6PJW0_9ZZZZ
Putative Flagellar GTP-binding protein {ECO:0000313|EMBL:CBH95188.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
putative Flagellar GTP-binding protein
Displaying 21 items

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