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04302015_13_scaffold_55

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_55_1
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1309
DNA (1308bp) protein (436aa)
Transcriptional regulator, LuxR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FDI3_CONWI
Spore germination protein GerE {ECO:0000313|EMBL:KJL32378.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
LuxR family transcriptional regulator
04302015_13_scaffold_55_2
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1306..1965
DNA (660bp) protein (220aa)
Predicted membrane protein n=1 Tax=Microbacterium testaceum (strain StLB037) RepID=E8NAS9_MICTS rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33963.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_55_3
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(2018..3406)
DNA (1389bp) protein (463aa)
Glycine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00006545}; EC=6.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00253, ECO:0000256|SAAS:SAAS00015978};; Glycyl-tRNA synthetase {ECO:000025
Glycine--tRNA ligase n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2TCI5_LEIAQ rbh
glycyl-tRNA synthetase rbh
04302015_13_scaffold_55_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3508..4830
DNA (1323bp) protein (441aa)
esterase n=1 Tax=Corynebacterium-like bacterium B27 RepID=UPI0003B48249
Putative esterase {ECO:0000313|EMBL:KJL33960.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
esterase family protein
04302015_13_scaffold_55_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4882..7413
DNA (2532bp) protein (844aa)
Phosphatidylglycerol lysyltransferase {ECO:0000313|EMBL:KJL33959.1}; EC=2.3.2.3 {ECO:0000313|EMBL:KJL33959.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microb
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI00036E4539 rbh
hypothetical protein rbh
04302015_13_scaffold_55_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7452..8750)
DNA (1299bp) protein (433aa)
Na+/H+ antiporter n=1 Tax=Leifsonia xyli subsp. cynodontis DSM 46306 RepID=U3PFR6_LEIXC rbh
Potassium/proton antiporter {ECO:0000313|EMBL:KJL33958.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
Na+/H+ antiporter rbh
04302015_13_scaffold_55_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8773..9714)
DNA (942bp) protein (314aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI000376FDF1 rbh
HTH-type transcriptional regulator CysL {ECO:0000313|EMBL:KJL33957.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
LysR family transcriptional regulator
04302015_13_scaffold_55_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9812..10852
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2RA26_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33956.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_55_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10973..11989)
DNA (1017bp) protein (339aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034539FD rbh
Magnesium transport protein CorA {ECO:0000313|EMBL:KJL33955.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.
magnesium transporter; K03284 magnesium transporter
04302015_13_scaffold_55_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12065..13345)
DNA (1281bp) protein (427aa)
D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH {ECO:0000313|EMBL:KJL33954.1}; EC=3.4.-.- {ECO:0000313|EMBL:KJL33954.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbac
beta-lactamase class C and other penicillin binding proteins; K01286 D-alanyl-D-alanine carboxypeptidase [EC:3.4.16.4]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00030B8CC3 rbh
04302015_13_scaffold_55_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13468..14205)
DNA (738bp) protein (246aa)
LuxR family transcriptional regulator n=1 Tax=Humibacter albus RepID=UPI0003B36F1F rbh
Transcriptional regulatory protein LiaR {ECO:0000313|EMBL:KJL33953.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
04302015_13_scaffold_55_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14202..15470)
DNA (1269bp) protein (423aa)
Sensor histidine kinase LiaS {ECO:0000313|EMBL:KJL33952.1}; EC=2.7.13.3 {ECO:0000313|EMBL:KJL33952.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium
hypothetical protein n=1 Tax=Cryocola sp. 340MFSha3.1 RepID=UPI000362FFD1 rbh
signal transduction histidine kinase
04302015_13_scaffold_55_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15467..16042)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Leifsonia aquatica ATCC 14665 RepID=U2QZX6_LEIAQ rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL22791.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_55_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16164..17675)
DNA (1512bp) protein (504aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KEZ6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:KJL33950.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
HNH endonuclease
04302015_13_scaffold_55_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17813..18019
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034A2976 rbh
Ribbon-helix-helix protein, copG family {ECO:0000313|EMBL:KJL33946.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
04302015_13_scaffold_55_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18016..18387
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002FB40E5 rbh
Toxin Doc {ECO:0000313|EMBL:KJL33945.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
death-on-curing protein; K07341 death on curing protein
04302015_13_scaffold_55_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18401..19426)
DNA (1026bp) protein (342aa)
membrane protein n=1 Tax=Microbacterium sp. B19 RepID=UPI0003B3D229 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33944.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
04302015_13_scaffold_55_18
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19473..20855)
DNA (1383bp) protein (461aa)
ATP-dependent RecD-like DNA helicase {ECO:0000313|EMBL:KJL33943.1}; EC=3.6.4.12 {ECO:0000313|EMBL:KJL33943.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microb
helicase n=1 Tax=Microbacterium barkeri RepID=UPI0002E5AD0A rbh
ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member rbh
04302015_13_scaffold_55_19
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21099..22217
DNA (1119bp) protein (373aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000374C7E3 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33942.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_55_20
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22260..24416)
DNA (2157bp) protein (719aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KCX6_9MICO rbh
Cytochrome c oxidase caa3 assembly factor (Caa3-CtaG) {ECO:0000313|EMBL:KJL33941.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microba
hypothetical protein; K02351 putative membrane protein; K07245 putative copper resistance protein D rbh
04302015_13_scaffold_55_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24547..24834)
DNA (288bp) protein (96aa)
Transcriptional regulator n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K0C4_9MICO rbh
DNA-binding protein HU {ECO:0000313|EMBL:KJL22783.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hup; bacterial nucleoid DNA-binding protein; K03530 DNA-binding protein HU-beta
04302015_13_scaffold_55_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(25032..25613)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI00036A2C40 rbh
HTH-type transcriptional regulator AcrR {ECO:0000313|EMBL:KJL22782.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadir
Transcriptional regulator, TetR family
04302015_13_scaffold_55_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25751..26593
DNA (843bp) protein (281aa)
hypothetical protein n=1 Tax=Microbacterium yannicii RepID=UPI0002D49634 rbh
Alpha/beta hydrolase family protein {ECO:0000313|EMBL:KJL22781.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadiracht
arylesterase-like protein
04302015_13_scaffold_55_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(26678..26983)
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KA47_9MICO rbh
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpsN; ribosomal protein S14; K02954 small subunit ribosomal protein S14
04302015_13_scaffold_55_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(26987..27157)
DNA (171bp) protein (57aa)
50S ribosomal protein L33 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5K0H7_9MICO rbh
50S ribosomal protein L33 {ECO:0000256|HAMAP-Rule:MF_00294}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpmG; ribosomal protein L33; K02913 large subunit ribosomal protein L33
04302015_13_scaffold_55_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(27157..27393)
DNA (237bp) protein (79aa)
50S ribosomal protein L28 n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KAW5_9MICO rbh
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
rpmB; ribosomal protein L28; K02902 large subunit ribosomal protein L28
04302015_13_scaffold_55_27
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27530..28336)
DNA (807bp) protein (269aa)
Putative 3-methyladenine DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097343}; EC=3.2.2.- {ECO:0000256|HAMAP-Rule:MF_00527, ECO:0000256|SAAS:SAAS00097340};; TaxID=582680 sp
3-methyladenine DNA glycosylase; K03652 DNA-3-methyladenine glycosylase [EC:3.2.2.21]
3-methyladenine DNA glycosylase n=1 Tax=Microbacterium sp. B19 RepID=UPI00034DCBF3 rbh
04302015_13_scaffold_55_28
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28336..30198)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C6C3B rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33935.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
04302015_13_scaffold_55_29
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30188..31006)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000376C377 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33934.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_55_30
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30999..32072)
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E465EC rbh
Putative permease {ECO:0000313|EMBL:KJL33933.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
permease; K07089
Displaying items 1-30 of 32 in total

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