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04302015_13_scaffold_138

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_138_1
unknown

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1..81
DNA (81bp) protein (27aa)

This feature has no annotations

04302015_13_scaffold_138_2
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(168..1103)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034B1E17 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK95863.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
04302015_13_scaffold_138_3
Microbacterium mangrovi, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1103..1825)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00036A6106 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHK95865.1}; TaxID=1348253 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium mangrovi.;"
04302015_13_scaffold_138_4
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1847..2302)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000366653F rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33055.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
putative secreted protein
04302015_13_scaffold_138_5
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2299..2799)
DNA (501bp) protein (167aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002E7DC3B rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33054.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_138_6
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2765..3181)
DNA (417bp) protein (139aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003640DAD rbh
TadE-like protein {ECO:0000313|EMBL:KJL33053.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_138_7
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3188..3385)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XIY1_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33052.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_138_8
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3425..4360)
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Microbacterium sp. 292MF RepID=UPI0003760616 rbh
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:KJL33051.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M
conserved membrane protein, putative pilus assembly protein
04302015_13_scaffold_138_9
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4348..5202)
DNA (855bp) protein (285aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003471844 rbh
Bacterial type II secretion system protein F domain protein {ECO:0000313|EMBL:KJL33050.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="M
conserved membrane protein, putative pilus assembly protein
04302015_13_scaffold_138_10
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5199..6374)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Microbacterium maritypicum MF109 RepID=T5KLU3_9MICO rbh
Putative conjugal transfer protein {ECO:0000313|EMBL:KJL33049.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachta
putative ATPase, type II/type IV pathway secretion protein; K02283 pilus assembly protein CpaF
04302015_13_scaffold_138_11
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6453..6902)
DNA (450bp) protein (150aa)
MarR family transcriptional regulator n=1 Tax=Microbacterium sp. B19 RepID=UPI00034A36B6 rbh
Transcriptional regulator SlyA {ECO:0000313|EMBL:KJL33048.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
MarR family transcriptional regulator
04302015_13_scaffold_138_12
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7013..8218
DNA (1206bp) protein (402aa)
MFS transporter n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000349DE08 rbh
Inner membrane transport protein YdhP {ECO:0000313|EMBL:KJL33047.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirac
sugar (and other) transporter family protein rbh
04302015_13_scaffold_138_13
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8259..9083
DNA (825bp) protein (275aa)
Putative oxidoreductase {ECO:0000313|EMBL:KJL26216.1}; EC=1.-.-.- {ECO:0000313|EMBL:KJL26216.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" so
oxidoreductase n=1 Tax=Microbacterium barkeri RepID=UPI0002D77A86 rbh
aldo/keto reductase rbh
04302015_13_scaffold_138_trna_1
unknown

Not on your lists

comp(9138..9219)
DNA (82bp)
transferRNA
04302015_13_scaffold_138_14
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9359..10045
DNA (687bp) protein (229aa)
SNARE associated protein n=2 Tax=Microbacterium RepID=H8E9Q1_9MICO rbh
Inner membrane protein YghB {ECO:0000313|EMBL:KJL33044.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein rbh
04302015_13_scaffold_138_15
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10053..10889)
DNA (837bp) protein (279aa)
DNA repair protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000379CD8F rbh
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azad
hypothetical protein; K10979 DNA end-binding protein Ku
04302015_13_scaffold_138_16
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10951..12972
DNA (2022bp) protein (674aa)
ATP-dependent DNA ligase; K01971 DNA ligase (ATP) [EC:6.5.1.1]
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI0002DB9A8D rbh
Putative DNA ligase-like protein {ECO:0000313|EMBL:KJL33042.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.
04302015_13_scaffold_138_17
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12993..13925)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI000317F191 rbh
Cobalt-zinc-cadmium resistance protein CzcD {ECO:0000313|EMBL:KJL33041.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium az
Co/Zn/Cd efflux system component; K03295 cation efflux system protein, CDF family
04302015_13_scaffold_138_18
Microbacterium maritypicum, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14061..15017
DNA (957bp) protein (319aa)
arsenic resistance protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B53871 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQM86799.1}; TaxID=1333857 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium maritypicum MF109.;"
Bile acid:sodium symporter rbh
04302015_13_scaffold_138_19
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15036..15626)
DNA (591bp) protein (197aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
xanthosine triphosphate pyrophosphatase; K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19]
NTP phosphatase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI0003756742 rbh
04302015_13_scaffold_138_20
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15626..16384)
DNA (759bp) protein (253aa)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
rph; RNase PH; K00989 ribonuclease PH [EC:2.7.7.56]
ribonuclease PH n=1 Tax=Microbacterium yannicii RepID=UPI0002D91426 rbh
04302015_13_scaffold_138_21
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16381..17214)
DNA (834bp) protein (278aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Micro
murI; glutamate racemase; K01776 glutamate racemase [EC:5.1.1.3]
glutamate racemase n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000373FB4C rbh
04302015_13_scaffold_138_22
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17284..18606
DNA (1323bp) protein (441aa)
Nicotinate phosphoribosyltransferase {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163}; EC=6.3.4.21 {ECO:0000256|RuleBase:RU003838, ECO:0000256|SAAS:SAAS00075163};; TaxID=582680 species="
nicotinic acid phosphoribosyltransferase; K00763 nicotinate phosphoribosyltransferase [EC:2.4.2.11]
nicotinate phosphoribosyltransferase n=1 Tax=Microbacterium barkeri RepID=UPI00031037DE rbh
04302015_13_scaffold_138_23
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18700..19011)
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00035DD7A5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33036.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein
04302015_13_scaffold_138_24
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19021..20559)
DNA (1539bp) protein (513aa)
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI00034C9B89 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJL33035.1}; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium azadirachtae.;"
hypothetical protein; K01992 ABC-2 type transport system permease protein
04302015_13_scaffold_138_25
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20565..22253)
DNA (1689bp) protein (563aa)
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA {ECO:0000313|EMBL:KJL33034.1}; EC=3.6.3.- {ECO:0000313|EMBL:KJL33034.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Mi
hypothetical protein n=1 Tax=Microbacterium barkeri RepID=UPI00038069E1 rbh
multidrug ABC transporter ATPase; K01990 ABC-2 type transport system ATP-binding protein rbh
04302015_13_scaffold_138_26
Microbacterium azadirachtae, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22605..22985
DNA (381bp) protein (127aa)
Bifunctional protein GlmU {ECO:0000313|EMBL:KJL33033.1}; EC=2.3.1.157 {ECO:0000313|EMBL:KJL33033.1};; TaxID=582680 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;
UDP-N-acetylglucosamine pyrophosphorylase n=1 Tax=Microbacterium yannicii RepID=UPI000304FA80 rbh
sugar nucleotidyltransferase
Displaying 27 items

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