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04302015_13_scaffold_434

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_434_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(286..867)
DNA (582bp) protein (194aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY04_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95327.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
04302015_13_scaffold_434_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(890..2896)
DNA (2007bp) protein (669aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY03_HALNC
methyl-accepting chemotaxis sensory transducer; K03406 methyl-accepting chemotaxis protein
Methyl-accepting chemotaxis sensory transducer {ECO:0000313|EMBL:ACX95326.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;
04302015_13_scaffold_434_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2995..3618)
DNA (624bp) protein (208aa)
HPP family protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY02_HALNC
HPP family protein
HPP family protein {ECO:0000313|EMBL:ACX95325.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus n
04302015_13_scaffold_434_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3615..3965)
DNA (351bp) protein (117aa)
CBS domain containing membrane protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY01_HALNC
hypothetical protein
CBS domain containing membrane protein {ECO:0000313|EMBL:ACX95324.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source
04302015_13_scaffold_434_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(4010..4111)
DNA (102bp) protein (34aa)
CBS domain containing membrane protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY01_HALNC
hypothetical protein
CBS domain containing membrane protein {ECO:0000313|EMBL:ACX95324.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source
04302015_13_scaffold_434_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4183..4377)
DNA (195bp) protein (65aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KY00_HALNC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95323.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
04302015_13_scaffold_434_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4468..5133)
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ9_HALNC
hypothetical protein; K06890
Uncharacterized protein {ECO:0000313|EMBL:ACX95322.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
04302015_13_scaffold_434_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5264..5845
DNA (582bp) protein (194aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KXZ8_HALNC
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACX95321.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" sourc
04302015_13_scaffold_434_9
Janthinobacterium sp. HH01, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5927..7186
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CCA83 rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:ELX10180.1}; TaxID=1198452 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janth
xerD2; site-specific recombinase XerD
04302015_13_scaffold_434_10
unknown

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7237..7407
DNA (171bp) protein (57aa)

This feature has no annotations

04302015_13_scaffold_434_11

Not on your lists

7407..9449
DNA (2043bp) protein (681aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036881A0 rbh
Uncharacterized protein {ECO:0000313|EMBL:CBI06233.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
h16_A0821; hypothetical protein
04302015_13_scaffold_434_12
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9459..11648
DNA (2190bp) protein (730aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000373612D rbh
Putative phage integrase {ECO:0000313|EMBL:CDG84020.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="Janthinobac
h16_A0822; phage integrase
04302015_13_scaffold_434_13
Cupriavidus necator, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11635..12555
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365A53D rbh
h16_A0823; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ91970.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator
04302015_13_scaffold_434_14
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12555..13394
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000368E697 rbh
short-chain dehydrogenase/reductase SDR
Tax=CG_Hydro_01
04302015_13_scaffold_434_15
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14069..15217)
DNA (1149bp) protein (383aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI00036FBCC0 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ91926.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
04302015_13_scaffold_434_16
Agrobacterium rhizogenes, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15214..15825)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Rhizobium leguminosarum RepID=UPI000362402A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAJ91927.1}; TaxID=1220581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;"
hypothetical protein
04302015_13_scaffold_434_17
Rhodovulum sp. NI22, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15962..16531)
DNA (570bp) protein (190aa)
Uncharacterized protein n=2 Tax=Rhizobium meliloti RepID=F6DY81_SINMK rbh
Uncharacterized protein {ECO:0000313|EMBL:KGB82805.1}; TaxID=1469613 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. NI2
hypothetical protein
04302015_13_scaffold_434_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16730..17170
DNA (441bp) protein (147aa)
TnpA of Tn2 n=2 Tax=Klebsiella pneumoniae RepID=S4VC81_KLEPN
tniA; putative transposase
Integrase core domain protein {ECO:0000313|EMBL:EFU32438.1}; TaxID=679202 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escheric
Displaying 18 items

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