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04302015_13_scaffold_273

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_273_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..2881
DNA (2880bp) protein (960aa)
Acriflavin resistance protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ0_HALNC
Acriflavin resistance protein {ECO:0000313|EMBL:ACX95663.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothi
acriflavin resistance protein
04302015_13_scaffold_273_trna_1
unknown

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3121..3194
DNA (74bp)
transferRNA
04302015_13_scaffold_273_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3617..3922
DNA (306bp) protein (102aa)
CopG domain protein DNA-binding domain protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ3_HALNC rbh
CopG domain-containing protein DNA-binding domain-containing protein
CopG domain protein DNA-binding domain protein {ECO:0000313|EMBL:ACX95666.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;
04302015_13_scaffold_273_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3910..4275
DNA (366bp) protein (122aa)
MazF family transcriptional regulator; K07171 mRNA interferase [EC:3.1.-.-]
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; H
mRNA interferase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KYZ4_HALNC rbh
04302015_13_scaffold_273_4
Xanthomonas axonopodis, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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4390..4611
DNA (222bp) protein (74aa)
Uncharacterized protein n=5 Tax=Xanthomonas RepID=Q8PRJ9_XANAC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KGK64918.1}; TaxID=317013 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas axonop
04302015_13_scaffold_273_5
Allochromatium vinosum, Allochromatium, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4608..4928
DNA (321bp) protein (107aa)
transcriptional modulator of MazE/toxin, MazF; K07171 mRNA interferase [EC:3.1.-.-]
Transcriptional modulator of MazE/toxin, MazF n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RS55_ALLVD rbh
Transcriptional modulator of MazE/toxin, MazF {ECO:0000313|EMBL:ADC63992.1}; TaxID=572477 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium.;" source=
04302015_13_scaffold_273_6
Candidatus Accumulibacter sp. BA-93, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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5267..7021
DNA (1755bp) protein (585aa)
Type I restriction enzyme EcoKI M protein {ECO:0000313|EMBL:EXI84099.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EXI84099.1};; TaxID=1454004 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Acc
type I restriction-modification; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
N-6 DNA methylase n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P119_9BACT rbh
04302015_13_scaffold_273_7
Aeromonas media, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7018..8349
DNA (1332bp) protein (444aa)
restriction modification system DNA specificity domain-containing protein; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Restriction modification system DNA specificity subunit n=1 Tax=Aeromonas media WS RepID=K2I6F5_AERME rbh
Type I restriction-modification system specificity subunit {ECO:0000313|EMBL:AHX61100.1}; TaxID=1208104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadaceae; Aeromonas
04302015_13_scaffold_273_8
RifOxyA12_full_Desulfobacula_46_16_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8472..8678
DNA (207bp) protein (69aa)
Putative uncharacterized protein n=1 Tax=Candidatus Kuenenia stuttgartiensis RepID=Q1PXE9_9BACT rbh
addiction module protein
Tax=RifOxyA12_full_Desulfobacula_46_16_curated
04302015_13_scaffold_273_9
Geoalkalibacter ferrihydriticus, Geoalkalibacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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8675..8983
DNA (309bp) protein (103aa)
Putative uncharacterized protein n=1 Tax=Chlorobium phaeobacteroides (strain BS1) RepID=B3EJ45_CHLPB rbh
Uncharacterized protein {ECO:0000313|EMBL:KIH77308.1}; TaxID=1121915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geoalkalibacter.;" source="Geoalkalibac
hypothetical protein
04302015_13_scaffold_273_10
CG_Rhodof_01, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8999..12112
DNA (3114bp) protein (1038aa)
hypothetical protein; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
Uncharacterized protein n=1 Tax=Holophaga foetida DSM 6591 RepID=H1P114_9BACT rbh
Tax=CG_Rhodof_01
04302015_13_scaffold_273_11
Marinobacter lipolyticus, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12414..12977)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Marinobacter lipolyticus SM19 RepID=R8B3B3_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EON93066.1}; TaxID=1318628 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter lip
hypothetical protein
04302015_13_scaffold_273_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13350..14735)
DNA (1386bp) protein (462aa)
oxygen-independent coproporphyrinogen III oxidase (EC:1.3.99.22); K02495 oxygen-independent coproporphyrinogen III oxidase [EC:1.3.99.22]
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Haloth
Coproporphyrinogen-III oxidase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZ48_HALNC rbh
04302015_13_scaffold_273_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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15000..15614
DNA (615bp) protein (205aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZ49_HALNC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX95722.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
04302015_13_scaffold_273_14
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15704..16633
DNA (930bp) protein (310aa)
ABC transporter related protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZ50_HALNC rbh
ABC transporter; K09687 antibiotic transport system ATP-binding protein
ABC transporter related protein {ECO:0000313|EMBL:ACX95723.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halot
04302015_13_scaffold_273_15
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16630..17019
DNA (390bp) protein (130aa)
ABC-2 type transporter n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZ51_HALNC
ABC transporter; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothio
04302015_13_scaffold_273_16
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17025..17363
DNA (339bp) protein (113aa)
ABC-2 type transporter n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZ51_HALNC
ABC transporter; K09686 antibiotic transport system permease protein
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothio
04302015_13_scaffold_273_17
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17366..19324
DNA (1959bp) protein (653aa)
peptidase U32; K08303 putative protease [EC:3.4.-.-]
Peptidase U32 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0KZ52_HALNC
Peptidase U32 {ECO:0000313|EMBL:ACX95725.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacillus neapol
Displaying 18 items

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