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04302015_13_scaffold_521

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_13_scaffold_521_1
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1..492)
DNA (492bp) protein (164aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0C8_HALNC
04302015_13_scaffold_521_2
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(489..809)
DNA (321bp) protein (107aa)
phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20); K01889 phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0C8_HALNC
Suspect SCG annotation. See neighboring gene [04302015_13_scaffold_521_1].
04302015_13_scaffold_521_3
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(1032..1391)
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0C9_HALNC rbh
50S ribosomal protein L20; K02887 large subunit ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halo
04302015_13_scaffold_521_4
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(1405..1599)
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D0_HALNC rbh
50S ribosomal protein L35; K02916 large subunit ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halo
04302015_13_scaffold_521_5
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1913..2251)
DNA (339bp) protein (113aa)
Translation initiation factor IF-3 n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D1_HALNC
translation initiation factor IF-3; K02520 translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillac
04302015_13_scaffold_521_6
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2762..4675)
DNA (1914bp) protein (638aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
threonyl-tRNA synthetase; K01868 threonyl-tRNA synthetase [EC:6.1.1.3]
Threonine--tRNA ligase n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D2_HALNC rbh
04302015_13_scaffold_521_7
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5026..5748
DNA (723bp) protein (241aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D3_HALNC rbh
hypothetical protein; K09921 hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACX96156.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
04302015_13_scaffold_521_8
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5748..6737
DNA (990bp) protein (330aa)
Tyrosine recombinase XerC n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D4_HALNC rbh
integrase family protein; K03733 integrase/recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothi
04302015_13_scaffold_521_9
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6820..7359
DNA (540bp) protein (180aa)
20S proteasome subunits A and B; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] rbh
ATP-dependent protease subunit HslV {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019556}; EC=3.4.25.2 {ECO:0000256|HAMAP-Rule:MF_00248, ECO:0000256|SAAS:SAAS00019493};; TaxID=555778 specie
ATP-dependent protease subunit HslV n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D5_HALNC rbh
04302015_13_scaffold_521_10
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7356..8696
DNA (1341bp) protein (447aa)
ATP-dependent protease ATPase subunit HslU n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D6_HALNC rbh
heat shock protein HslVU, ATPase HslU; K03667 ATP-dependent HslUV protease ATP-binding subunit HslU
ATP-dependent protease ATPase subunit HslU {ECO:0000256|HAMAP-Rule:MF_00249, ECO:0000256|SAAS:SAAS00089650}; Unfoldase HslU {ECO:0000256|HAMAP-Rule:MF_00249}; TaxID=555778 species="Bacteria; Proteobac
04302015_13_scaffold_521_11
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8712..9134
DNA (423bp) protein (141aa)
Putative uncharacterized protein n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D7_HALNC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACX96160.1}; TaxID=555778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Halothiobacillaceae; Halothiobacillus.;" source="Halothiobacil
04302015_13_scaffold_521_12
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9160..9903
DNA (744bp) protein (248aa)
ubiquinone/menaquinone biosynthesis methyltransferase; K03183 ubiquinone/menaquinone biosynthesis methyltransferase [EC:2.1.1.163 2.1.1.201]
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE {ECO:0000256|HAMAP-Rule:MF_01813}; EC=2.1.1.163 {ECO:0000256|HAMAP-Rule:MF_01813};; EC=2.1.1.201 {ECO:0000256|HAMAP-Rule:MF_01813};; 2-meth
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D8_HALNC rbh
04302015_13_scaffold_521_13
Halothiobacillus neapolitanus, Halothiobacillus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9965..10612
DNA (648bp) protein (216aa)
Membrane-bound lytic murein transglycosylase F {ECO:0000256|SAAS:SAAS00176609}; EC=4.-.-.- {ECO:0000256|SAAS:SAAS00276317};; EC=4.2.2.- {ECO:0000256|SAAS:SAAS00276308};; EC=4.2.2.n1 {ECO:0000256|SAAS:
Lytic transglycosylase catalytic n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0D9_HALNC
lytic transglycosylase
Displaying 13 items

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