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04302015_14_scaffold_59

Search features with annotation key words

Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_14_scaffold_59_1
unknown

Not on your lists

comp(86..625)
DNA (540bp) protein (180aa)

This feature has no annotations

04302015_14_scaffold_59_2
unknown

Not on your lists

comp(680..856)
DNA (177bp) protein (59aa)

This feature has no annotations

04302015_14_scaffold_59_3
unknown

Not on your lists

1574..2239
DNA (666bp) protein (222aa)

This feature has no annotations

04302015_14_scaffold_59_4
unknown

Not on your lists

2290..2955
DNA (666bp) protein (222aa)

This feature has no annotations

04302015_14_scaffold_59_5
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2952..3737)
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE23 RepID=UPI0003708F62
UBA/THIF-type NAD/FAD binding domain containing protein {ECO:0000313|EMBL:EGL53876.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylo
UBA/THIF-type NAD/FAD binding protein
04302015_14_scaffold_59_6
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3730..4467)
DNA (738bp) protein (246aa)
hypothetical protein n=1 Tax=Lamprocystis purpurea RepID=UPI000371FCE5
Uncharacterized protein {ECO:0000313|EMBL:CDI04364.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
04302015_14_scaffold_59_7
unknown

Not on your lists

comp(4464..5621)
DNA (1158bp) protein (386aa)

This feature has no annotations

04302015_14_scaffold_59_8
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5878..7083)
DNA (1206bp) protein (402aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; B
DNA methylase N-4/N-6 domain protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JU39_BURVG
DNA methylase N-4/N-6 domain-containing protein
04302015_14_scaffold_59_9
unknown

Not on your lists

comp(7131..7337)
DNA (207bp) protein (69aa)

This feature has no annotations

04302015_14_scaffold_59_10

Not on your lists

comp(7349..7861)
DNA (513bp) protein (171aa)
Putative uncharacterized protein n=1 Tax=Methylophaga aminisulfidivorans MP RepID=F5T0M1_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KKN80471.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
04302015_14_scaffold_59_11

Not on your lists

comp(7941..9746)
DNA (1806bp) protein (602aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI000366A0A7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN80470.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
PRTRC system ParB family protein
04302015_14_scaffold_59_12
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9902..10399)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI00035E89D1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC73326.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
04302015_14_scaffold_59_13
unknown

Not on your lists

comp(10422..10739)
DNA (318bp) protein (106aa)

This feature has no annotations

04302015_14_scaffold_59_14
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11200..13164
DNA (1965bp) protein (655aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI000375777A
helicase domain protein
Helicase domain protein {ECO:0000313|EMBL:ADC73298.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
04302015_14_scaffold_59_15
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13280..15841
DNA (2562bp) protein (854aa)
Relaxase n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SGQ8_THISK rbh
Relaxase; K12070 conjugal transfer pilus assembly protein TraI
Relaxase {ECO:0000313|EMBL:ADC73299.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio sp. (str
04302015_14_scaffold_59_16
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15838..17697
DNA (1860bp) protein (620aa)
Type IV conjugative transfer system protein TraD n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SGQ9_THISK rbh
type IV conjugative transfer system protein TraD; K12071 conjugal transfer pilus assembly protein TraD
Type IV conjugative transfer system protein TraD {ECO:0000313|EMBL:ADC73300.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivib
04302015_14_scaffold_59_17
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17734..18375
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SGR0_THISK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC73301.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
04302015_14_scaffold_59_18
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18467..19531
DNA (1065bp) protein (355aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE23 RepID=UPI00037D36C2 rbh
type II secretion system protein E
Type II secretion system protein E {ECO:0000313|EMBL:ADC73302.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source=
04302015_14_scaffold_59_19
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19574..19936
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI00037136EE
Conjugal transfer protein TrbC; K03197 type IV secretion system protein VirB2
Conjugal transfer protein TrbC {ECO:0000313|EMBL:ADC73303.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thi
04302015_14_scaffold_59_20
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19939..20262
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE23 RepID=UPI000381E416
hypothetical protein; K03198 type IV secretion system protein VirB3
Uncharacterized protein {ECO:0000313|EMBL:ADC73305.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
04302015_14_scaffold_59_21
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20238..22736
DNA (2499bp) protein (833aa)
Type IV secretory pathway VirB4 components-like protein n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SGR5_THISK rbh
type IV secretory pathway VirB4 components-like protein; K03199 type IV secretion system protein VirB4 rbh
Type IV secretory pathway VirB4 components-like protein {ECO:0000313|EMBL:ADC73306.1}; Flags: Precursor;; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorho
04302015_14_scaffold_59_22
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22711..23511
DNA (801bp) protein (267aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI0003728D02
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC73307.1}; Flags: Precursor;; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;"
04302015_14_scaffold_59_23
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23526..24506
DNA (981bp) protein (327aa)
TrbL/VirB6 plasmid conjugal transfer protein n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SGR7_THISK
TrbL/VirB6 plasmid conjugal transfer protein; K07344 type IV secretion system protein TrbL
TrbL/VirB6 plasmid conjugal transfer protein {ECO:0000313|EMBL:ADC73308.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.
04302015_14_scaffold_59_24
unknown

Not on your lists

24514..24723
DNA (210bp) protein (70aa)

This feature has no annotations

04302015_14_scaffold_59_25
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24716..25423
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI000372F22C
Type IV secretory pathway TrbF protein-like protein; K03200 type IV secretion system protein VirB5
Type IV secretory pathway TrbF protein-like protein {ECO:0000313|EMBL:ADC73309.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkali
04302015_14_scaffold_59_26
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25424..26206
DNA (783bp) protein (261aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI000362BE18
Conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9
Conjugal transfer protein TrbG/VirB9/CagX {ECO:0000313|EMBL:ADC73310.1}; Flags: Precursor;; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; T
04302015_14_scaffold_59_27
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26234..27487
DNA (1254bp) protein (418aa)
Conjugation TrbI family protein n=1 Tax=Thioalkalivibrio sp. (strain K90mix) RepID=D3SGS0_THISK
conjugation TrbI family protein; K03195 type IV secretion system protein VirB10
Conjugation TrbI family protein {ECO:0000313|EMBL:ADC73311.1}; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Th
04302015_14_scaffold_59_28
Nitrincola lacisaponensis, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27544..28215
DNA (672bp) protein (224aa)
Lytic transglycosylase catalytic n=1 Tax=Halothiobacillus neapolitanus (strain ATCC 23641 / c2) RepID=D0L0B2_HALNC
Lytic transglycosylase {ECO:0000313|EMBL:KDE40234.1}; TaxID=267850 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola lacisaponensis.;"
lytic transglycosylase
04302015_14_scaffold_59_29
unknown

Not on your lists

28229..28873
DNA (645bp) protein (215aa)

This feature has no annotations

04302015_14_scaffold_59_30
Thioalkalivibrio sp. K90mix, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28866..29783
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE16 RepID=UPI00037831FD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADC73314.1}; Flags: Precursor;; TaxID=396595 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;"
Displaying items 1-30 of 45 in total

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