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04302015_14_scaffold_309

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_14_scaffold_309_1

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comp(236..463)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PN45_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:CBH96347.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
04302015_14_scaffold_309_2
Serratia fonticola, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(580..1851)
DNA (1272bp) protein (424aa)
Uncharacterized protein n=1 Tax=Serratia fonticola AU-AP2C RepID=U2MDS5_SERFO rbh
Glycosyl transferase {ECO:0000313|EMBL:AKG70735.1}; TaxID=47917 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia fonticola.;"
glycosyltransferase rbh
04302015_14_scaffold_309_3
Candidatus Accumulibacter sp. BA-92, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1875..3500)
DNA (1626bp) protein (542aa)
Glycosyl transferase group 1 n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZH77_9PROT rbh
Glycosyl transferase group 1 {ECO:0000313|EMBL:EXI80119.1}; TaxID=1454003 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-9
group 1 glycosyl transferase rbh
04302015_14_scaffold_309_4
Desulfocapsa sulfexigens, Desulfocapsa, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3491..4813)
DNA (1323bp) protein (441aa)
Methyltransferase, FkbM family n=1 Tax=Desulfocapsa sulfexigens (strain DSM 10523 / SB164P1) RepID=M1PFU5_DESSD
methyltransferase, FkbM family
Methyltransferase, FkbM family {ECO:0000313|EMBL:AGF78545.1}; TaxID=1167006 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfocapsa.;" source="Desulfo
04302015_14_scaffold_309_5
unknown

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comp(4806..4928)
DNA (123bp) protein (41aa)

This feature has no annotations

04302015_14_scaffold_309_6
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4925..5701)
DNA (777bp) protein (259aa)
Glycosyl transferase family 2 n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V8N1_VARPE
family 2 glycosyl transferase; K07011
Putative glycosyltransferase {ECO:0000313|EMBL:CAZ87113.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain D
04302015_14_scaffold_309_7
RLO_Pseudomonas_59_9, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5725..5880)
DNA (156bp) protein (52aa)
mannose-1-phosphate guanylyltransferase (GDP)/mannose-6-phosphate isomerase, type 2 (EC:2.7.7.22 5.3.1.8); K00971 mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]
mannose-1-phosphate guanylyltransferase n=1 Tax=Legionella tunisiensis RepID=UPI0002FB90CA
Tax=RifCSPlowO2_12_Pseudomonas_59_9_curated
04302015_14_scaffold_309_8
RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5877..6314)
DNA (438bp) protein (146aa)
PilT protein domain-containing protein id=14626827 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
putative nucleic acid-binding protein, contains PIN domain
Tax=RIFOXYA2_FULL_Deltaproteobacteria_55_11_curated
04302015_14_scaffold_309_9
RBG_16_Deltaproteobacteria_54_18_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(6311..6592)
DNA (282bp) protein (94aa)
Tax=RBG_16_Deltaproteobacteria_54_18_curated
04302015_14_scaffold_309_10
Burkholderiales bacterium GJ-E10, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6767..7621)
DNA (855bp) protein (285aa)
sugar ABC transporter ATP-binding protein n=1 Tax=Thiomonas sp. FB-6 RepID=UPI0003657E2A rbh
O-antigen export system ATP-binding protein rfbE {ECO:0000313|EMBL:BAP89393.1}; TaxID=1469502 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacteriu
ABC transporter; K09691 lipopolysaccharide transport system ATP-binding protein
04302015_14_scaffold_309_11
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(7643..8023)
DNA (381bp) protein (127aa)
Putative toxin of toxin-antitoxin stability system, PIN domain n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B2AJI8_CUPTR
putative toxin of toxin-antitoxin stability system, PIN domain
Putative toxin of toxin-antitoxin stability system, PIN domain {ECO:0000313|EMBL:CAP64241.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cup
04302015_14_scaffold_309_12
Burkholderia grimmiae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8020..8268)
DNA (249bp) protein (83aa)
Prevent-host-death family protein n=1 Tax=Isoptericola variabilis (strain 225) RepID=F6FSY3_ISOV2
Antitoxin {ECO:0000313|EMBL:KDR25194.1}; TaxID=1071679 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia grimmiae.;"
prevent-host-death family protein
04302015_14_scaffold_309_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8588..8794)
DNA (207bp) protein (69aa)
Putative Transcriptional regulator AbrB n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CR75_THIA3
putative Transcriptional regulator AbrB
Putative Transcriptional regulator AbrB {ECO:0000313|EMBL:CAZ87116.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydan
04302015_14_scaffold_309_14
unknown

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8906..9865
DNA (960bp) protein (320aa)

This feature has no annotations

04302015_14_scaffold_309_15
unknown

Not on your lists

comp(9862..9975)
DNA (114bp) protein (38aa)

This feature has no annotations

04302015_14_scaffold_309_16
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10026..10154)
DNA (129bp) protein (43aa)
ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-]
Lipid A export ATP-binding/permease protein MsbA {ECO:0000256|HAMAP-Rule:MF_01703}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01703};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Bu
Putative LIPID A EXPORT ATP-BINDING/PERMEASE PROTEIN MSBA n=1 Tax=Thiomonas arsenitoxydans (strain DSM 22701 / CIP 110005 / 3As) RepID=D6CLL8_THIA3
Displaying 16 items

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