ggKbase home page

04302015_14_scaffold_142

Search features with annotation key words

Displaying 18 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_14_scaffold_142_1
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1266..1589)
DNA (324bp) protein (108aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromati
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DHV6_9GAMM
CRISPR-associated protein Cas2
04302015_14_scaffold_142_2
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1580..2332)
DNA (753bp) protein (251aa)
Putative uncharacterized protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DHV5_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:AHF00093.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkali
hypothetical protein
04302015_14_scaffold_142_3
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2336..3313)
DNA (978bp) protein (326aa)
CRISPR-associated endonuclease Cas1 {ECO:0000256|HAMAP-Rule:MF_01470, ECO:0000313|EMBL:KIN91493.1}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01470};; TaxID=1572758 species="Bacteria; Proteobacteria; Beta
CRISPR-associated endonuclease Cas1 n=1 Tax=Thauera phenylacetica B4P RepID=N6ZT39_9RHOO rbh
CRISPR-associated protein Cas1 rbh
04302015_14_scaffold_142_4
Candidatus Symbiobacter mobilis, Candidatus Symbiobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3319..3600)
DNA (282bp) protein (94aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=946483 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholder
CRISPR-associated endoribonuclease Cas2 n=1 Tax=Candidatus Symbiobacter mobilis CR RepID=U5N6D5_9BURK
CRISPR-associated protein Cas2
04302015_14_scaffold_142_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3683..4912)
DNA (1230bp) protein (410aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BL61_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:CDH46473.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
CRISPR-associated TM1812 family protein
04302015_14_scaffold_142_6
uncultured Thiohalocapsa sp. PB-PSB1, Thiohalocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4933..5277)
DNA (345bp) protein (115aa)
DNA-binding protein n=1 Tax=uncultured Thiohalocapsa sp. PB-PSB1 RepID=V4JQM9_9GAMM
DNA-binding protein {ECO:0000313|EMBL:ESQ16934.1}; TaxID=1385625 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiohalocapsa; environmental samples.;" source="un
hypothetical protein
04302015_14_scaffold_142_7
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5369..5767)
DNA (399bp) protein (133aa)
Ribonuclease VapC n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GR05_9GAMM
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_14_scaffold_142_8
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5760..6002)
DNA (243bp) protein (81aa)
Looped-hinge helix DNA binding domain, AbrB family n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GV53_9GAMM
AbrB family DNA-binding protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_14_scaffold_142_9
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6077..7396)
DNA (1320bp) protein (440aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALE11 RepID=UPI000373CCED rbh
Cmr6 family CRISPR-associated RAMP protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_14_scaffold_142_10
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7399..7761)
DNA (363bp) protein (121aa)
CRISPR-associated protein Cmr5 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B4BDC5
CRISPR-associated family protein {ECO:0000313|EMBL:KIN91396.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20
CRISPR-associated Cmr5 family protein
04302015_14_scaffold_142_11
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7761..8672)
DNA (912bp) protein (304aa)
CRISPR-associated protein Cmr4 n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B6A8DC rbh
CRISPR-associated RAMP Cmr4 family protein family protein; K09000 hypothetical protein rbh
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_14_scaffold_142_12
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8687..9847)
DNA (1161bp) protein (387aa)
CRISPR-associated protein (Cas_Cmr3) n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1Z4_9GAMM rbh
CRISPR-associated Cmr3 family protein; K09127 hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_14_scaffold_142_13
Thauera sp. SWB20, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9844..12891)
DNA (3048bp) protein (1016aa)
CRISPR-associated protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1Z5_9GAMM rbh
CRISPR-associated family protein {ECO:0000313|EMBL:KIN91512.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20
CRISPR-associated RAMP Crm2 family protein; K07016
04302015_14_scaffold_142_14
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12953..13168
DNA (216bp) protein (72aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JS81_9GAMM
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:AEM47678.1}; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" sou
04302015_14_scaffold_142_15
R_Gamma2_65_16, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13125..13550
DNA (426bp) protein (142aa)
Ribonuclease VapC n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JS80_9GAMM
PilT protein domain-containing protein; K07062
Tax=RIFCSPHIGHO2_01_FULL_Gamma2_65_16_curated
04302015_14_scaffold_142_16
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13560..14588)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Thiorhodovibrio sp. 970 RepID=H8Z1Z6_9GAMM rbh
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_14_scaffold_142_17
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14585..15733)
DNA (1149bp) protein (383aa)
CRISPR-associated protein, NE0113 family n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / D) RepID=D3RW26_ALLVD rbh
CRISPR-associated protein, NE0113 family
Tax=CG_Hydro_01
04302015_14_scaffold_142_18
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15784..16731)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Nitrosococcus halophilus (strain Nc4) RepID=D5BXY1_NITHN
hypothetical protein
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
Displaying 18 items

View Taxonomy