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04302015_14_scaffold_338

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_14_scaffold_338_1
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..374)
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X657_THIK1
Putative Polyphosphate kinase {ECO:0000313|EMBL:CDW94129.1}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
hypothetical protein
04302015_14_scaffold_338_2
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(545..1123)
DNA (579bp) protein (193aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] rbh
Aromatic acid decarboxylase {ECO:0000256|RuleBase:RU362054}; EC=4.1.1.- {ECO:0000256|RuleBase:RU362054};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.
3-octaprenyl-4-hydroxybenzoate carboxy-lyase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X656_THIK1 rbh
04302015_14_scaffold_338_3
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1180..1497)
DNA (318bp) protein (106aa)
Glutaredoxin n=2 Tax=Thiomonas RepID=D5X655_THIK1
glutaredoxin-like protein; K07390 monothiol glutaredoxin
Glutaredoxin {ECO:0000256|PIRNR:PIRNR005894}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain DSM 22701 / CIP
04302015_14_scaffold_338_4
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1533..1835)
DNA (303bp) protein (101aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X654_THIK1
04302015_14_scaffold_338_5
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1825..2340)
DNA (516bp) protein (172aa)
protein-(glutamine-N5) methyltransferase; K02493 release factor glutamine methyltransferase [EC:2.1.1.-]
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
Release factor glutamine methyltransferase n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X654_THIK1
04302015_14_scaffold_338_6
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2342..3418)
DNA (1077bp) protein (359aa)
Peptide chain release factor 1 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X653_THIK1 rbh
peptide chain release factor 1; K02835 peptide chain release factor 1
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thi
04302015_14_scaffold_338_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3512..4819)
DNA (1308bp) protein (436aa)
hemA; Glutamyl-tRNA reductase (GluTR) (EC:1.2.1.70) rbh
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
Glutamyl-tRNA reductase n=2 Tax=Thiomonas RepID=D5X652_THIK1 rbh
04302015_14_scaffold_338_8
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4909..5196
DNA (288bp) protein (96aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X651_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG31968.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia
04302015_14_scaffold_338_9
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5443..5811
DNA (369bp) protein (123aa)
50S ribosomal protein L14 n=2 Tax=Thiomonas RepID=D5X650_THIK1
50S ribosomal protein L14; K02874 large subunit ribosomal protein L14
50S ribosomal protein L14 {ECO:0000256|HAMAP-Rule:MF_01367, ECO:0000256|RuleBase:RU003950}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Th
04302015_14_scaffold_338_10
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5845..6162
DNA (318bp) protein (106aa)
50S ribosomal protein L24 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X649_THIK1
50S ribosomal protein L24; K02895 large subunit ribosomal protein L24
50S ribosomal protein L24 {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas sp. CB2.;"
04302015_14_scaffold_338_11
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6174..6713
DNA (540bp) protein (180aa)
50S ribosomal protein L5 n=2 Tax=Thiomonas RepID=D5X648_THIK1 rbh
50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 rbh
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333, ECO:0000256|RuleBase:RU003931}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thi
04302015_14_scaffold_338_12
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6723..7028
DNA (306bp) protein (102aa)
30S ribosomal protein S14 n=2 Tax=Thiomonas RepID=D5X647_THIK1
30S ribosomal protein S14; K02954 small subunit ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12)
04302015_14_scaffold_338_13
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7123..7521
DNA (399bp) protein (133aa)
30S ribosomal protein S8 n=2 Tax=Thiomonas RepID=D5X646_THIK1
rpsH; 30S ribosomal protein S8
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302, ECO:0000313|EMBL:CAZ89629.1}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiom
04302015_14_scaffold_338_14
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


7535..8068
DNA (534bp) protein (178aa)
50S ribosomal protein L6 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X645_THIK1 rbh
50S ribosomal protein L6; K02933 large subunit ribosomal protein L6
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thio
04302015_14_scaffold_338_15
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8080..8439
DNA (360bp) protein (120aa)
50S ribosomal protein L18 n=2 Tax=Thiomonas RepID=D5X644_THIK1
rplR; 50S ribosomal subunit protein L18
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain
04302015_14_scaffold_338_16
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8453..8971
DNA (519bp) protein (173aa)
30S ribosomal protein S5 n=2 Tax=Thiomonas RepID=D5X643_THIK1 rbh
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 rbh
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307, ECO:0000256|SAAS:SAAS00085406}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thi
04302015_14_scaffold_338_17
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


8977..9162
DNA (186bp) protein (62aa)
50S ribosomal protein L30 n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X642_THIK1
50S ribosomal protein L30; K02907 large subunit ribosomal protein L30
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thi
04302015_14_scaffold_338_18
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9258..9704
DNA (447bp) protein (149aa)
50S ribosomal protein L15 n=2 Tax=Thiomonas RepID=D5X641_THIK1
rplO; 50S ribosomal subunit protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341, ECO:0000256|RuleBase:RU003889}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thi
04302015_14_scaffold_338_19
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


9719..11038
DNA (1320bp) protein (440aa)
Protein translocase subunit SecY n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X640_THIK1 rbh
preprotein translocase subunit SecY; K03076 preprotein translocase subunit SecY rbh
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; TaxID=554131 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" sou
04302015_14_scaffold_338_20
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11048..11266
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=2 Tax=Thiomonas RepID=D5X639_THIK1
infA; protein chain initiation factor IF-1
Translation initiation factor IF-1 {ECO:0000256|HAMAP-Rule:MF_00075}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (str
04302015_14_scaffold_338_21
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11285..11398
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=2 Tax=Thiomonas RepID=D5X638_THIK1
rpmJ; 50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Th
04302015_14_scaffold_338_22
Thiomonas arsenitoxydans, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11432..11797
DNA (366bp) protein (122aa)
30S ribosomal protein S13 n=2 Tax=Thiomonas RepID=D5X637_THIK1
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=426114 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas arsenitoxydans (strain
04302015_14_scaffold_338_23
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11814..12221
DNA (408bp) protein (136aa)
30S ribosomal protein S11 n=2 Tax=Thiomonas RepID=D5X636_THIK1
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12)
04302015_14_scaffold_338_24
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12397..13020
DNA (624bp) protein (208aa)
30S ribosomal protein S4 n=2 Tax=Thiomonas RepID=D5X635_THIK1 rbh
rpsD; 30S ribosomal subunit protein S4 rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (
04302015_14_scaffold_338_25
Thiomonas sp. CB2, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13136..14122
DNA (987bp) protein (329aa)
rpoA; DNA-directed RNA polymerase alpha chain (RNAP alpha subunit) (Transcriptase alpha chain) (RNA polymerase alpha subunit) (EC:2.7.7.6) rbh
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha n=7 Tax=Thiomonas RepID=D6CM39_THIA3 rbh
04302015_14_scaffold_338_26
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14579..14785
DNA (207bp) protein (69aa)
Nod factor export ATP-binding protein I {ECO:0000256|HAMAP-Rule:MF_01704}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01704};; Nodulation ATP-binding protein I {ECO:0000256|HAMAP-Rule:MF_01704}; TaxID=7537
ABC transporter related protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X632_THIK1
ABC transporter; K09695 lipooligosaccharide transport system ATP-binding protein
Displaying 26 items

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