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04302015_14_scaffold_63

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_14_scaffold_63_1
Pseudomonas sp. CF161, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

110..583
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Pseudomonas sp. CF161 RepID=S6IVG3_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPL06033.1}; TaxID=911241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. CF
hypothetical protein
04302015_14_scaffold_63_2
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1016..3184
DNA (2169bp) protein (723aa)
TonB-denpendent receptor n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00031B82EE rbh
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:ACF49855.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotroph
04302015_14_scaffold_63_3
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3181..3771
DNA (591bp) protein (197aa)
aminotransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002E7106F
NODE_54, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ97218.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
pnuC; PnuC-like transporter linked to homoserine kinase and OMR; K03811 nicotinamide mononucleotide transporter
04302015_14_scaffold_63_4
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3921..5318
DNA (1398bp) protein (466aa)
hypothetical protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000377FE5F rbh
Uncharacterized protein {ECO:0000313|EMBL:AHY57539.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomo
hypothetical protein rbh
04302015_14_scaffold_63_5
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5388..6212
DNA (825bp) protein (275aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000364278A rbh
restriction endonuclease
Tax=BJP_S1_SUB10_Methylophilales_55_32
04302015_14_scaffold_63_6
unknown

Not on your lists

6248..6679
DNA (432bp) protein (144aa)

This feature has no annotations

04302015_14_scaffold_63_7
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6734..7093)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=Xanthomonas RepID=UPI0001CBEE69
Uncharacterized protein {ECO:0000313|EMBL:KFA28702.1}; TaxID=1094180 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasic
hypothetical protein
04302015_14_scaffold_63_8
Xanthomonas vasicola, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7090..7362)
DNA (273bp) protein (91aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas perforans 91-118 RepID=F0BYG6_9XANT
Uncharacterized protein {ECO:0000313|EMBL:KGR58130.1}; TaxID=56459 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source="Xanthomonas vasicol
hypothetical protein
04302015_14_scaffold_63_9
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7726..9588)
DNA (1863bp) protein (621aa)
Putative uncharacterized protein n=1 Tax=Pseudomonas putida (strain W619) RepID=B1J233_PSEPW rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACA71189.1}; TaxID=390235 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida
04302015_14_scaffold_63_10
Stenotrophomonas sp. RIT309, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11158..13845)
DNA (2688bp) protein (896aa)
Pyruvate dehydrogenase E1 component {ECO:0000256|PIRNR:PIRNR000156}; EC=1.2.4.1 {ECO:0000256|PIRNR:PIRNR000156};; TaxID=1470590 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
2-oxo-acid dehydrogenase E1 subunit, homodimeric type (EC:1.2.4.1); K00163 pyruvate dehydrogenase E1 component [EC:1.2.4.1] rbh
Pyruvate dehydrogenase E1 component n=2 Tax=Stenotrophomonas maltophilia RepID=J7UQ02_STEMA rbh
04302015_14_scaffold_63_11
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14278..14787
DNA (510bp) protein (170aa)
PadR-like family transcriptional regulator n=1 Tax=Stenotrophomonas maltophilia AU12-09 RepID=M5U161_STEMA
PadR family transcriptional regulator {ECO:0000313|EMBL:AHY60529.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source=
putative PadR family transcriptional regulator
04302015_14_scaffold_63_12
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14812..15603
DNA (792bp) protein (264aa)
iron utilization protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003127A17 rbh
Iron utilization protein {ECO:0000313|EMBL:AHY60530.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophom
iron-chelator utilization protein rbh
04302015_14_scaffold_63_13
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15674..15985
DNA (312bp) protein (104aa)
hypothetical protein n=1 Tax=Xanthomonadaceae RepID=UPI00029A6FF1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQM75234.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
04302015_14_scaffold_63_14
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16055..16504
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Stenotrophomonas maltophilia MF89 RepID=T5KUE9_STEMA
Uncharacterized protein {ECO:0000313|EMBL:EQM82631.1}; TaxID=1333853 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas malto
hypothetical protein
04302015_14_scaffold_63_15
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16615..17304)
DNA (690bp) protein (230aa)
YceI family protein n=1 Tax=Stenotrophomonas maltophilia (strain R551-3) RepID=B4SHM1_STRM5 rbh
hypothetical protein rbh
YceI family protein {ECO:0000313|EMBL:ACF50064.1}; Flags: Precursor;; TaxID=391008 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotro
04302015_14_scaffold_63_16
Xanthomonas sacchari, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17390..17980)
DNA (591bp) protein (197aa)
Putative NADH dehydrogenase/NAD(P)H nitroreductase SB85_10765 {ECO:0000256|HAMAP-Rule:MF_01204}; EC=1.-.-.- {ECO:0000256|HAMAP-Rule:MF_01204};; TaxID=56458 species="Bacteria; Proteobacteria; Gammaprot
rutE; nitroreductase (EC:1.-.-.-); K09019 3-hydroxypropanoate dehydrogenase [EC:1.1.1.-] rbh
malonic semialdehyde reductase n=1 Tax=Xanthomonas RepID=UPI000262B53D rbh
04302015_14_scaffold_63_17
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18111..19085
DNA (975bp) protein (325aa)
nucleoside-diphosphate-sugar epimerase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0003076BB0 rbh
Nucleoside-diphosphate sugar epimerase {ECO:0000313|EMBL:AHY60536.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source
hypothetical protein; K07276 hypothetical protein rbh
04302015_14_scaffold_63_18
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19122..19970
DNA (849bp) protein (283aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00037393D8 rbh
Membrane protein {ECO:0000313|EMBL:AHY60537.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
Putative outer membrane protein rbh
04302015_14_scaffold_63_19
Xanthomonas gardneri, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19987..20505
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Xanthomonas gardneri ATCC 19865 RepID=F0C4Z3_9XANT
Uncharacterized protein {ECO:0000313|EMBL:EGD19413.1}; Flags: Precursor;; TaxID=925777 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Xanthomonas.;" source=
hypothetical protein
04302015_14_scaffold_63_20
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20666..21220
DNA (555bp) protein (185aa)
membrane protein n=1 Tax=Stenotrophomonas maltophilia RepID=UPI000319CDA5 rbh
Membrane protein {ECO:0000313|EMBL:AHY60540.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas rhi
Putative preQ0 transporter; K09125 hypothetical protein rbh
04302015_14_scaffold_63_21
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21245..24064)
DNA (2820bp) protein (940aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-
glnE; putative glutamate-ammonia-ligase adenylyltransferase (EC:2.7.7.42); K00982 glutamate-ammonia-ligase adenylyltransferase [EC:2.7.7.42] rbh
glutamate-ammonia ligase adenylyltransferase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI00036E7C3C rbh
04302015_14_scaffold_63_22
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24166..24597
DNA (432bp) protein (144aa)
Ribonuclease VapC44 n=62 Tax=Mycobacterium tuberculosis complex RepID=VPC44_MYCTU
toxin
Tax=CG_Rhodof_02
04302015_14_scaffold_63_23
Stenotrophomonas rhizophila, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24902..26416
DNA (1515bp) protein (505aa)
succinate CoA transferase (EC:3.1.2.1); K01067 acetyl-CoA hydrolase [EC:3.1.2.1] rbh
acetyl-CoA hydrolase n=1 Tax=Stenotrophomonas maltophilia RepID=UPI0002FCFAD7 rbh
Acetyl-CoA hydrolase {ECO:0000313|EMBL:AHY60543.1}; TaxID=216778 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas.;" source="Stenotrophomonas
04302015_14_scaffold_63_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26486..26824)
DNA (339bp) protein (113aa)
Protein YegP n=1 Tax=Enterobacter cloacae subsp. dissolvens SDM RepID=I6SKX6_ENTCL
protein YegP
Uncharacterized protein {ECO:0000313|EMBL:ETX63641.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
04302015_14_scaffold_63_25
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26957..27217)
DNA (261bp) protein (87aa)
Putative endonuclease containing a URI domain n=1 Tax=Stenotrophomonas maltophilia D457 RepID=I0KTB7_STEMA
putative endonuclease containing a URI domain; K07461 putative endonuclease
Nuclease {ECO:0000313|EMBL:KDE90542.1}; TaxID=1451188 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas maltophilia group.;"
04302015_14_scaffold_63_26
unknown

Not on your lists

comp(27236..27679)
DNA (444bp) protein (148aa)

This feature has no annotations

04302015_14_scaffold_63_27
Xanthomonas translucens, Xanthomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27827..28900)
DNA (1074bp) protein (358aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54); K01626 3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54] rbh
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Xanthomonas translucens DAR61454 RepID=L7GK84_XANCT rbh
04302015_14_scaffold_63_28
Lysobacter arseniciresistens, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29207..29653
DNA (447bp) protein (149aa)
thioredoxin; K03672 thioredoxin 2 [EC:1.8.1.8]
thioredoxin n=1 Tax=Xanthomonas sacchari RepID=UPI000262B54B
Thioredoxin {ECO:0000313|EMBL:KGM57764.1}; TaxID=913325 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter arseniciresistens ZS
04302015_14_scaffold_63_29
Stenotrophomonas maltophilia, Stenotrophomonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29735..30850)
DNA (1116bp) protein (372aa)
60 kDa chaperonin n=1 Tax=Stenotrophomonas maltophilia RA8 RepID=M5D3N2_STEMA
groEL; chaperonin GroEL; K04077 chaperonin GroEL
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1118157 spec
Displaying 29 items

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