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04302015_16_scaffold_313

Search features with annotation key words

Displaying items 1-30 of 40 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_313_1
unknown

Not on your lists

comp(3..74)
DNA (72bp) protein (24aa)

This feature has no annotations

04302015_16_scaffold_313_2
Methylomonas denitrificans, Methylomonas, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(71..805)
DNA (735bp) protein (245aa)
hypothetical protein n=1 Tax=Methylotenera sp. 1P/1 RepID=UPI00037087AF
Uncharacterized protein {ECO:0000313|EMBL:KHD30461.1}; TaxID=1538553 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomonas.;" source="Methylomonas denitrificans.;"
04302015_16_scaffold_313_3
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1005..4139)
DNA (3135bp) protein (1045aa)
cation transporter n=1 Tax=Azoarcus toluclasticus RepID=UPI0003757F58
heavy metal efflux pump CzcA; K07787 Cu(I)/Ag(I) efflux system membrane protein CusA
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_16_scaffold_313_4
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4150..5748)
DNA (1599bp) protein (533aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI0003728C87
Cobalt/zinc/cadmium efflux RND transporter, membrane fusion protein, CzcB family; K07798 Cu(I)/Ag(I) efflux system membrane protein CusB
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_16_scaffold_313_5
Methylophaga nitratireducenticrescens, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5766..7007)
DNA (1242bp) protein (414aa)
Heavy metal RND efflux outer membrane protein, CzcC family n=1 Tax=Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM 25689 / JAM1) RepID=I1XJT0_METNJ
Heavy metal RND efflux outer membrane protein, CzcC family
Methylophaga nitratireducenticrescens strain JAM1, complete genome {ECO:0000313|EMBL:AFI84649.1}; Flags: Precursor;; TaxID=754476 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylophaga.;" source="Methylophaga nitratireducenticrescens (strain ATCC BAA-2433 / DSM; 25689 / JAM1).;"
04302015_16_scaffold_313_6
Burkholderia sp. CCGE1001, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7094..7501)
DNA (408bp) protein (136aa)
Copper binding periplasmic protein CusF n=1 Tax=Burkholderia sp. CCGE1001 RepID=E8YLI9_9BURK
Copper-binding periplasmic protein CusF
Copper binding periplasmic protein CusF {ECO:0000313|EMBL:ADX54873.1}; Flags: Precursor;; TaxID=640510 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. CCGE1001.;"
04302015_16_scaffold_313_7
Acinetobacter sp. NIPH 2100, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7641..8054
DNA (414bp) protein (138aa)
chemotaxis protein CheY n=1 Tax=Methylotenera mobilis RepID=UPI00035D4C1F
Uncharacterized protein {ECO:0000313|EMBL:ENX41462.1}; TaxID=1217708 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter sp. NIPH 2100.;"
putative response regulator for cobalt zinc cadmium resistance transcription regulator protein; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR
04302015_16_scaffold_313_8
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8307..8678)
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BNS5_9GAMM
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
04302015_16_scaffold_313_9
BJP_08E140C01_Xanthomonadales_64_42, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8675..8974)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6QJH6_9ZZZZ
hypothetical protein
Tax=BJP_08E140C01_Xanthomonadales_64_42
04302015_16_scaffold_313_10
unknown

Not on your lists

comp(9797..9943)
DNA (147bp) protein (49aa)

This feature has no annotations

04302015_16_scaffold_313_11
Pseudoalteromonas arctica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10093..10422)
DNA (330bp) protein (110aa)
Phage integrase n=1 Tax=Pseudoalteromonas arctica A 37-1-2 RepID=U1J0J0_9GAMM
Phage integrase {ECO:0000313|EMBL:ERG10428.1}; TaxID=1117313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalteromonas arctica A 37-1-2.;"
hypothetical protein
04302015_16_scaffold_313_12
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10608..10886
DNA (279bp) protein (93aa)
transcriptional regulator n=1 Tax=Thioalkalivibrio sp. ALJT RepID=UPI00035F9CCD
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competibacter denitrificans Run_A_D11.;"
himD; himD/ihfB; K05788 integration host factor subunit beta
04302015_16_scaffold_313_13
unknown

Not on your lists

10879..11022
DNA (144bp) protein (48aa)

This feature has no annotations

04302015_16_scaffold_313_14
Sutterella wadsworthensis, Sutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11022..11933
DNA (912bp) protein (304aa)
Uncharacterized protein n=1 Tax=Sutterella wadsworthensis 2_1_59BFAA RepID=K1JF48_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EKB30215.1}; TaxID=742823 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Sutterella.;" source="Sutterella wadsworthensis 2_1_59BFAA.;"
integrase/recombinase
04302015_16_scaffold_313_15
unknown

Not on your lists

11923..12297
DNA (375bp) protein (125aa)

This feature has no annotations

04302015_16_scaffold_313_16
Photobacterium profundum, Photobacterium, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12330..13334
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Photobacterium profundum RepID=Q6LVP2_PHOPR rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:CAG18633.1}; TaxID=74109 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Photobacterium.;" source="Photobacterium profundum (Photobacterium sp. (strain SS9)).;"
04302015_16_scaffold_313_17
unknown

Not on your lists

comp(13392..13805)
DNA (414bp) protein (138aa)

This feature has no annotations

04302015_16_scaffold_313_18
R_KAZAN_45_19, Kazan, Bacteria

Not on your lists

comp(13817..14026)
DNA (210bp) protein (70aa)
RNA polymerase sigma factor id=2923140 bin=GWC1_KAZAN_52_13 species=GWC1_KAZAN_52_13 genus=GWC1_KAZAN_52_13 taxon_order=GWC1_KAZAN_52_13 taxon_class=GWC1_KAZAN_52_13 phylum=KAZAN tax=GWC1_KAZAN_52_13 organism_group=Kazan
rpoD; RNA polymerase sigma factor RpoD; K03086 RNA polymerase primary sigma factor
Tax=RIFCSPLOWO2_01_FULL_KAZAN_45_19_curated
04302015_16_scaffold_313_19
unknown

Not on your lists

comp(14013..14681)
DNA (669bp) protein (223aa)

This feature has no annotations

04302015_16_scaffold_313_20
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14871..17252)
DNA (2382bp) protein (794aa)
AAA ATPase central domain protein n=1 Tax=Pseudoxanthomonas suwonensis (strain 11-1) RepID=E6WXD0_PSEUU rbh
ATPase AAA rbh
Tax=GWA2_Burkholderiales_64_37_curated
04302015_16_scaffold_313_21
unknown

Not on your lists

comp(17334..17495)
DNA (162bp) protein (54aa)

This feature has no annotations

04302015_16_scaffold_313_22
Sulfurospirillum sp. SCADC, Sulfurospirillum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17580..18782)
DNA (1203bp) protein (401aa)
Putative ATPase (AAA+ superfamily) n=1 Tax=Beggiatoa alba B18LD RepID=I3CIH3_9GAMM rbh
ATPase {ECO:0000313|EMBL:KFL34448.1}; TaxID=1537915 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Sulfurospirillum.;" source="Sulfurospirillum sp. SCADC.;"
conserved hypothetical protein (AAA domain) rbh
04302015_16_scaffold_313_23
unknown

Not on your lists

18920..19861
DNA (942bp) protein (314aa)

This feature has no annotations

04302015_16_scaffold_313_24
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

20079..20996
DNA (918bp) protein (306aa)
replicative DNA helicase; K02314 replicative DNA helicase [EC:3.6.4.12]
DNA helicase n=1 Tax=Prochlorothrix hollandica RepID=UPI0003724695
Replicative DNA helicase {ECO:0000313|EMBL:ACZ42721.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
04302015_16_scaffold_313_25
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21068..21301)
DNA (234bp) protein (78aa)
Prevent-host-death family protein n=1 Tax=Thauera sp. 28 RepID=N6YMF9_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:BAO80166.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
hypothetical protein
04302015_16_scaffold_313_26
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21282..21641)
DNA (360bp) protein (120aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037B3208
XRE family transcriptional regulator
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_16_scaffold_313_27
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21625..21879)
DNA (255bp) protein (85aa)
Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
04302015_16_scaffold_313_28
Massilia timonae, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22045..22959)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Massilia timonae CCUG 45783 RepID=K9DA93_9BURK rbh
Uncharacterized protein {ECO:0000313|EMBL:EKU80196.1}; TaxID=883126 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia timonae CCUG 45783.;"
5'-nucleotidase rbh
04302015_16_scaffold_313_29
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22989..26408)
DNA (3420bp) protein (1140aa)
hypothetical protein n=1 Tax=Dyella ginsengisoli RepID=UPI000345A164 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGC47037.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8).;"
04302015_16_scaffold_313_30
unknown

Not on your lists

comp(26405..28537)
DNA (2133bp) protein (711aa)

This feature has no annotations

Displaying items 1-30 of 40 in total

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