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04302015_16_scaffold_663

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_663_1
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..846)
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IW14_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB29976.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
binding-protein-dependent transport system protein
04302015_16_scaffold_663_2
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(847..2091)
DNA (1245bp) protein (415aa)
DegT/DnrJ/EryC1/StrS aminotransferase n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1WA96_ACISJ
Aminotransferase {ECO:0000313|EMBL:AJR26931.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp. YBL2.;"
DegT/DnrJ/EryC1/StrS aminotransferase
04302015_16_scaffold_663_3
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2093..2725)
DNA (633bp) protein (211aa)
Acetyltransferase n=1 Tax=Hyphomicrobium nitrativorans NL23 RepID=V5S986_9RHIZ
Acetyltransferase {ECO:0000313|EMBL:KGK99985.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
hypothetical protein
04302015_16_scaffold_663_4
Thalassobacter sp. 16PALIMAR09, Thalassobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2722..3321)
DNA (600bp) protein (200aa)
sugar transferase n=1 Tax=Pseudomonas pelagia RepID=UPI0003AA9A6B
Sugar transferase {ECO:0000313|EMBL:KGK99986.1}; TaxID=1225651 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Thalassobacter.;" source="Thalassobacter sp. 16PALIMAR09.;"
epsL; sugar transferase EpsL
04302015_16_scaffold_663_5
Halomonas sp. R57-5, Halomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3318..4472)
DNA (1155bp) protein (385aa)
glycosyl transferase family protein (EC:2.-.-.-); K01043 [EC:2.-.-.-] rbh
Glycosyl transferase n=1 Tax=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) RepID=Q0VR26_ALCBS rbh
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CEP36347.1}; TaxID=1610576 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Halomonadaceae; Halomonas.;" source="Halomonas sp. R57-5.;"
04302015_16_scaffold_663_6
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4487..6016)
DNA (1530bp) protein (510aa)
Integral membrane protein MviN n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VSJ5_CLOBI
Uncharacterized protein {ECO:0000313|EMBL:AHY45085.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
mviN1; virulence factor MviN
04302015_16_scaffold_663_7
Shewanella woodyi, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6019..7386)
DNA (1368bp) protein (456aa)
Putative uncharacterized protein n=1 Tax=Shewanella woodyi (strain ATCC 51908 / MS32) RepID=B1KME6_SHEWM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACA85944.1}; TaxID=392500 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanella woodyi (strain ATCC 51908 / MS32).;"
04302015_16_scaffold_663_8
Pseudomonas plecoglossicida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7383..7925)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Pseudomonas plecoglossicida NB2011 RepID=S2K4A1_9PSED
Uncharacterized protein {ECO:0000313|EMBL:EPB97106.1}; TaxID=1330531 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas plecoglossicida NB2011.;"
hypothetical protein
04302015_16_scaffold_663_9
Pseudomonas stutzeri, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7907..9136)
DNA (1230bp) protein (410aa)
Group 1 glycosyl transferase n=1 Tax=Pseudomonas plecoglossicida NB2011 RepID=S2K9B2_9PSED
Uncharacterized protein {ECO:0000313|EMBL:AHY45083.1}; TaxID=316 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas stutzeri (Pseudomonas perfectomarina).;"
group 1 glycosyl transferase
04302015_16_scaffold_663_10
Herbaspirillum seropedicae, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9150..10277)
DNA (1128bp) protein (376aa)
wecB; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14); K01791 UDP-N-acetylglucosamine 2-epimerase [EC:5.1.3.14]
UDP-N-acetylglucosamine 2-epimerase protein n=2 Tax=Herbaspirillum seropedicae RepID=D8IUF7_HERSS
UDP-N-acetylglucosamine 2-epimerase protein {ECO:0000313|EMBL:CAM32622.1}; TaxID=964 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum seropedicae.;"
04302015_16_scaffold_663_11
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10282..11154)
DNA (873bp) protein (291aa)
hypothetical protein; K00067 dTDP-4-dehydrorhamnose reductase [EC:1.1.1.133]
hypothetical protein n=1 Tax=Cupriavidus sp. BIS7 RepID=UPI0002F17370
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:KER71075.1}; TaxID=292 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia (Pseudomonas cepacia).;"
04302015_16_scaffold_663_12
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11170..12204)
DNA (1035bp) protein (345aa)
UDP-glucose 4-epimerase (EC:5.1.3.2) rbh
Putative LPS biosynthesis related dehydratase n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TY42_9RHOB rbh
UDP-glucose 4-epimerase {ECO:0000313|EMBL:KGB53665.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
04302015_16_scaffold_663_13
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12296..13597)
DNA (1302bp) protein (434aa)
nucleotide sugar dehydrogenase; K02474 UDP-N-acetyl-D-galactosamine dehydrogenase [EC:1.1.1.-] rbh
UDP-glucose/GDP-mannose dehydrogenase-like protein n=1 Tax=Sulfitobacter sp. EE-36 RepID=A3SGW5_9RHOB rbh
Polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase {ECO:0000313|EMBL:EAS51329.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
04302015_16_scaffold_663_14
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13600..14634)
DNA (1035bp) protein (345aa)
hypothetical protein; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] rbh
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IPV3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB30880.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
04302015_16_scaffold_663_15
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14671..15765)
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IYP5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB30881.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL-3.;"
polysaccharide biosynthesis protein CapD
Displaying 15 items

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