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04302015_16_scaffold_310

Search features with annotation key words

Displaying items 1-30 of 33 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_310_1
Betaproteobacteria bacterium MOLA814, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

514..2046
DNA (1533bp) protein (511aa)
Transcriptional regulatory protein ZraR n=1 Tax=Betaproteobacteria bacterium MOLA814 RepID=V5AGK8_9PROT
Transcriptional regulatory protein ZraR {ECO:0000313|EMBL:ESS14735.1}; TaxID=1408164 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="Betaproteobacteria bacterium MOLA814.;"
sigma-54 factor interaction domain-containing protein rbh
04302015_16_scaffold_310_2
unknown

Not on your lists

2105..2209
DNA (105bp) protein (35aa)

This feature has no annotations

04302015_16_scaffold_310_3
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2462..2959
DNA (498bp) protein (166aa)
TIR-like domain-containing protein (DUF1863) n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) RepID=K9RRX6_SYNP3
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_16_scaffold_310_4
Yersinia frederiksenii, Yersinia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2990..4432
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Vibrio anguillarum RepID=UPI0002F3CDB3 rbh
Uncharacterized protein {ECO:0000313|EMBL:AJI87975.1}; TaxID=1454377 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Yersinia.;" source="Yersinia frederiksenii Y225.;"
hypothetical protein rbh
04302015_16_scaffold_310_5
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4607..5401
DNA (795bp) protein (265aa)
von Willebrand factor, type A n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV60_POLNA rbh
von Willebrand factor, type A rbh
von Willebrand factor, type A {ECO:0000313|EMBL:ABM39538.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_310_6
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5402..6106
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV61_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39539.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_310_7
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6108..7538
DNA (1431bp) protein (477aa)
Serine/threonine protein kinase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV62_POLNA rbh
protein kinase rbh
Serine/threonine protein kinase {ECO:0000313|EMBL:ABM39540.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_310_8
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7543..10878
DNA (3336bp) protein (1112aa)
Superfamily I DNA and RNA helicases and helicase subunits-like protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV63_POLNA rbh
superfamily I DNA/RNA helicase rbh
Superfamily I DNA and RNA helicases and helicase subunits-like protein {ECO:0000313|EMBL:ABM39541.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_310_9
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10871..12292
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV64_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39542.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_310_10
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12354..14720
DNA (2367bp) protein (789aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV65_POLNA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABM39543.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_310_11
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14717..16261
DNA (1545bp) protein (515aa)
Uncharacterized protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VV66_POLNA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABM39544.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_310_12
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16303..16746
DNA (444bp) protein (148aa)
Transposase IS3/IS911 family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSL2_9BURK
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:EHL24674.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
transposase IS3/IS911 family protein
04302015_16_scaffold_310_13
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16722..17072
DNA (351bp) protein (117aa)
IS66 Orf2 family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSL1_9BURK
IS66 Orf2 family protein {ECO:0000313|EMBL:EHL24673.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
IS66 Orf2 family protein
04302015_16_scaffold_310_14
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17183..18769
DNA (1587bp) protein (529aa)
Transposase IS66 n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSL0_9BURK rbh
Transposase IS66 {ECO:0000313|EMBL:EHL24672.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
transposase IS66 rbh
04302015_16_scaffold_310_15
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18803..19591)
DNA (789bp) protein (263aa)
YecA family protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BSK9_9BURK rbh
YecA family protein {ECO:0000313|EMBL:EHL24671.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
yecA family protein rbh
04302015_16_scaffold_310_16
unknown

Not on your lists

19831..20001
DNA (171bp) protein (57aa)

This feature has no annotations

04302015_16_scaffold_310_17
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20235..23399)
DNA (3165bp) protein (1055aa)
type I site-specific deoxyribonuclease; K01153 type I restriction enzyme, R subunit [EC:3.1.21.3] rbh
Putative uncharacterized protein n=1 Tax=Comamonas testosteroni S44 RepID=D8D6J5_COMTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EFI61448.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
04302015_16_scaffold_310_18
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23483..24013)
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Burkholderia gladioli (strain BSR3) RepID=F2LKX5_BURGS
hypothetical protein
Tax=RBG_16_Betaproteobacteria_58_11_curated
04302015_16_scaffold_310_19
unknown

Not on your lists

comp(24010..24324)
DNA (315bp) protein (105aa)

This feature has no annotations

04302015_16_scaffold_310_20
Pseudomonas sp. 5, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24672..26045)
DNA (1374bp) protein (458aa)
hsdS3; type I restriction-modification system specificity subunit S; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Type I restriction-modification system specificity subunit S n=1 Tax=Pantoea ananatis LMG 5342 RepID=G9AN62_PANAN rbh
Uncharacterized protein {ECO:0000313|EMBL:KJK07818.1}; TaxID=1619949 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 5.;"
04302015_16_scaffold_310_21
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26042..27784)
DNA (1743bp) protein (581aa)
type I restriction enzyme M protein; K03427 type I restriction enzyme M protein [EC:2.1.1.72] rbh
N-6 DNA methylase n=1 Tax=Comamonas testosteroni S44 RepID=D8D6J1_COMTE rbh
N-6 DNA methylase {ECO:0000313|EMBL:EFI61444.1}; TaxID=563045 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni S44.;"
04302015_16_scaffold_310_22
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27846..28079)
DNA (234bp) protein (78aa)
Transcriptional regulator, Cro/CI family id=1278689 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
Cro/CI family transcriptional regulator; K07727 putative transcriptional regulator
Tax=GWE1_Burkholderiales_65_30_curated
04302015_16_scaffold_310_23
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28216..28455
DNA (240bp) protein (80aa)
Putative uncharacterized protein id=1278688 bin=GWE1_Burkholderiales_65_30 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWE1_Burkholderiales_65_30_curated
04302015_16_scaffold_310_24
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28448..29719
DNA (1272bp) protein (424aa)
phage integrase; K14059 integrase id=5083480 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
phage integrase; K14059 integrase rbh
Tax=GWE1_Burkholderiales_65_30_curated
04302015_16_scaffold_310_25
unknown

Not on your lists

29842..30459
DNA (618bp) protein (206aa)
id=12551581 bin=BDI tax=BDI organism_group=Betaproteobacteria
04302015_16_scaffold_310_26
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30499..30735
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12AL7_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE44425.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_310_27
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30749..31423
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXY8_9BURK rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EHL22948.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
hypothetical protein
04302015_16_scaffold_310_28
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31485..31856
DNA (372bp) protein (124aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BWM1_9BURK
Tax=GWA2_Burkholderiales_64_37_curated
04302015_16_scaffold_310_29
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32239..32580
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T4P4_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER60537.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein
04302015_16_scaffold_310_30
unknown

Not on your lists

comp(32628..33404)
DNA (777bp) protein (259aa)

This feature has no annotations

Displaying items 1-30 of 33 in total

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