ggKbase home page

04302015_16_scaffold_589

Search features with annotation key words

Displaying items 1-30 of 37 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_589_1
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..705
DNA (705bp) protein (235aa)
selenophosphate synthetase (EC:2.7.9.3); K01008 selenide, water dikinase [EC:2.7.9.3]
Selenide, water dikinase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Y0_ACIDE rbh
Selenide, water dikinase {ECO:0000313|EMBL:EER61834.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
04302015_16_scaffold_589_2
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(719..1246)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=mine drainage metagenome RepID=E6PLD1_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:KFB72730.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
04302015_16_scaffold_589_3
Candidatus Accumulibacter sp. SK-01, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1259..1606)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VU90_9BURK
Uncharacterized protein {ECO:0000313|EMBL:KFB67866.1}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;"
04302015_16_scaffold_589_4
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1787..2818)
DNA (1032bp) protein (344aa)
riboflavin biosynthesis protein ribd (EC:3.5.4.26 1.1.1.193); K11752 diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193] rbh
Riboflavin biosynthesis protein RibD n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Y2_ACIDE rbh
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
04302015_16_scaffold_589_5
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2869..3294)
DNA (426bp) protein (142aa)
Fimbrial protein pilin n=2 Tax=Alicycliphilus denitrificans RepID=E8TZF3_ALIDB
fimbrial protein pilin; K02655 type IV pilus assembly protein PilE
Fimbrial protein pilin {ECO:0000313|EMBL:AEB83599.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601).;"
04302015_16_scaffold_589_6
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3305..7027)
DNA (3723bp) protein (1241aa)
FG-GAP repeat-containing protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Y3_ACIDE rbh
FG-GAP repeat-containing protein {ECO:0000313|EMBL:EER61837.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
FG-GAP repeat-containing protein; K02674 type IV pilus assembly protein PilY1 rbh
04302015_16_scaffold_589_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7136..7978)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Y4_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER61838.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein; K02673 type IV pilus assembly protein PilX
04302015_16_scaffold_589_8
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7978..8868)
DNA (891bp) protein (297aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Y5_ACIDE rbh
Uncharacterized protein {ECO:0000313|EMBL:EER61839.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
hypothetical protein; K02672 type IV pilus assembly protein PilW rbh
04302015_16_scaffold_589_9
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8932..9591)
DNA (660bp) protein (220aa)
Type IV pilus modification protein PilV n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Y6_ACIDE rbh
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EER61840.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
type IV pilus modification protein PilV; K02671 type IV pilus assembly protein PilV
04302015_16_scaffold_589_10
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9576..10079)
DNA (504bp) protein (168aa)
Type-4 fimbrial pilin related signal peptide protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0C1Y9_9BURK
Type-4 fimbrial pilin related signal peptide protein {ECO:0000313|EMBL:EHL21314.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
type-4 fimbrial pilin related signal peptide protein; K08084 type IV fimbrial biogenesis protein FimT
04302015_16_scaffold_589_11

Not on your lists

comp(10274..10588)
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CUR6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD96805.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
04302015_16_scaffold_589_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10678..11835
DNA (1158bp) protein (386aa)
aspartate aminotransferase (EC:2.6.1.1) rbh
Aminotransferase class I and II n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Z0_ACIDE rbh
Aminotransferase class I and II {ECO:0000313|EMBL:EER61844.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
04302015_16_scaffold_589_13
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


11948..12214
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=4 Tax=Comamonadaceae RepID=RS15_VEREI
rpsO; 30S ribosomal protein S15; K02956 small subunit ribosomal protein S15
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
04302015_16_scaffold_589_14
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12423..14684
DNA (2262bp) protein (754aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
Polyribonucleotide nucleotidyltransferase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Z2_ACIDE rbh
polynucleotide phosphorylase/polyadenylase rbh
04302015_16_scaffold_589_15
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14831..15694
DNA (864bp) protein (288aa)
NAD(P)H quinone oxidoreductase, PIG3 family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Z3_ACIDE
NAD(P)H quinone oxidoreductase, PIG3 family {ECO:0000313|EMBL:EER61847.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
NAD(P)H quinone oxidoreductase, PIG3 family protein
04302015_16_scaffold_589_16
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15691..16434
DNA (744bp) protein (248aa)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517};; Triose-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
tpiA; triosephosphate isomerase (EC:5.3.1.1) rbh
Triosephosphate isomerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Z4_ACIDE rbh
04302015_16_scaffold_589_17
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16476..16862
DNA (387bp) protein (129aa)
Preprotein translocase, SecG subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Z5_ACIDE
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EER61849.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
preprotein translocase, secg subunit; K03075 preprotein translocase subunit SecG
04302015_16_scaffold_589_18
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17134..17493
DNA (360bp) protein (120aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3]
NADH-quinone oxidoreductase subunit A n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Z6_ACIDE
04302015_16_scaffold_589_19
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17519..17998
DNA (480bp) protein (160aa)
NADH dehydrogenase subunit B (EC:1.6.99.5) rbh
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
NADH-quinone oxidoreductase subunit B n=4 Tax=Bacteria RepID=K0HZI1_9BURK rbh
04302015_16_scaffold_589_20

Not on your lists

18009..18617
DNA (609bp) protein (203aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NADH-quinone oxidoreductase subunit C n=1 Tax=uncultured bacterium RepID=K2DU00_9BACT rbh
NADH (or F420H2) dehydrogenase subunit C rbh
04302015_16_scaffold_589_21
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18645..19898
DNA (1254bp) protein (418aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
NADH dehydrogenase subunit D (EC:1.6.99.5) rbh
NADH-quinone oxidoreductase subunit D n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T0Z9_ACIDE rbh
04302015_16_scaffold_589_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19895..20386
DNA (492bp) protein (164aa)
NADH-quinone oxidoreductase, E subunit n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T100_ACIDE rbh
NADH-quinone oxidoreductase subunit E
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
04302015_16_scaffold_589_23

Not on your lists

20383..21738
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CW14_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD97175.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NADH-quinone oxidoreductase subunit F rbh
04302015_16_scaffold_589_24

Not on your lists

21754..23889
DNA (2136bp) protein (712aa)
NADH dehydrogenase subunit G (EC:1.6.5.3) rbh
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DM85_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD98386.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
04302015_16_scaffold_589_25

Not on your lists

23886..24968
DNA (1083bp) protein (361aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5) rbh
NADH-quinone oxidoreductase subunit H n=1 Tax=uncultured bacterium RepID=K2EIQ6_9BACT rbh
04302015_16_scaffold_589_26
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24981..25493
DNA (513bp) protein (171aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
NADH dehydrogenase subunit I (EC:1.6.99.5) rbh
NADH-quinone oxidoreductase subunit I n=1 Tax=Acidovorax sp. KKS102 RepID=K0HWH4_9BURK rbh
04302015_16_scaffold_589_27

Not on your lists

25546..26214
DNA (669bp) protein (223aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 n=1 Tax=uncultured bacterium RepID=K2DLV0_9BACT rbh
NADH-ubiquinone/plastoquinone oxidoreductase chain 6 {ECO:0000313|EMBL:EKD99042.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NADH-ubiquinone/plastoquinone oxidoreductase subunit 6 rbh
04302015_16_scaffold_589_28
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26211..26519
DNA (309bp) protein (103aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
NADH-quinone oxidoreductase subunit K n=4 Tax=Acidovorax RepID=K0I212_9BURK
NAD(P)H-quinone oxidoreductase subunit 4L
04302015_16_scaffold_589_29

Not on your lists

26548..28587
DNA (2040bp) protein (680aa)
proton-translocating NADH-quinone oxidoreductase subunit l (EC:1.6.99.5); K00341 NADH-quinone oxidoreductase subunit L [EC:1.6.5.3] rbh
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2D142_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD99045.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
04302015_16_scaffold_589_30
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28601..30076
DNA (1476bp) protein (492aa)
NADH:ubiquinone oxidoreductase subunit M n=1 Tax=Acidovorax radicis RepID=UPI0002377114 rbh
Proton-translocating NADH-quinone oxidoreductase subunit M {ECO:0000313|EMBL:EHL21333.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
proton-translocating NADH-quinone oxidoreductase subunit M rbh
Displaying items 1-30 of 37 in total

View Taxonomy