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04302015_16_scaffold_1283

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_1283_1

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comp(3..230)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DLA5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD98797.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
alkyl hydroperoxide reductase
04302015_16_scaffold_1283_2

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comp(347..616)
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=1 Tax=uncultured bacterium RepID=K2EJY1_9BACT
30S ribosomal protein S17 {ECO:0000256|HAMAP-Rule:MF_01345, ECO:0000256|RuleBase:RU003873}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rpsQ; 30S ribosomal protein S17
04302015_16_scaffold_1283_3
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(626..820)
DNA (195bp) protein (65aa)
50S ribosomal protein L29 n=1 Tax=Acidovorax radicis RepID=UPI0002377C8A
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. NO-1.;"
50S ribosomal protein L29
04302015_16_scaffold_1283_4

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comp(837..1253)
DNA (417bp) protein (139aa)
50S ribosomal protein L16 n=2 Tax=Bacteria RepID=C5T6A8_ACIDE
50S ribosomal protein L16 {ECO:0000256|HAMAP-Rule:MF_01342, ECO:0000256|RuleBase:RU004414}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16
04302015_16_scaffold_1283_5
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(1256..2140)
DNA (885bp) protein (295aa)
30S ribosomal protein S3 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6A7_ACIDE rbh
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldii 2AN.;"
30S ribosomal protein S3; K02982 small subunit ribosomal protein S3 rbh
04302015_16_scaffold_1283_6
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2155..2487)
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=2 Tax=Acidovorax RepID=F0Q4G3_ACIAP
50S ribosomal protein L22; K02890 large subunit ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB; 1011).;"
04302015_16_scaffold_1283_7
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2497..2775)
DNA (279bp) protein (93aa)
30S ribosomal protein S19 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6A5_ACIDE
30S ribosomal protein S19; K02965 small subunit ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
04302015_16_scaffold_1283_8
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2786..3610)
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6A4_ACIDE rbh
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
rplB; 50S ribosomal protein L2 rbh
04302015_16_scaffold_1283_9
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3613..3927)
DNA (315bp) protein (105aa)
50S ribosomal protein L23 n=3 Tax=Acidovorax RepID=K0HME2_9BURK
rplW; 50S ribosomal protein L23
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. KKS102.;"
04302015_16_scaffold_1283_10
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3924..4544)
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6A2_ACIDE rbh
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
rplD; 50S ribosomal protein L4 rbh
04302015_16_scaffold_1283_11
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4544..5215)
DNA (672bp) protein (224aa)
50S ribosomal protein L3 n=1 Tax=Acidovorax sp. CF316 RepID=J0UFY0_9BURK rbh
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
rplC; 50S ribosomal protein L3 rbh
04302015_16_scaffold_1283_12
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(5431..5742)
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=7 Tax=Comamonadaceae RepID=RS10_VEREI
30S ribosomal protein S10; K02946 small subunit ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
04302015_16_scaffold_1283_13
Nitrincola sp. AK23, Nitrincola, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(5769..5867)
DNA (99bp) protein (33aa)
Elongation factor Tu (Fragment) n=4 Tax=Oxalobacteraceae RepID=J3HRK1_9BURK
translation elongation factor Tu; K02358 elongation factor Tu
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; TaxID=1229521 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Nitrincola.;" source="Nitrincola sp. AK23.;"
Displaying 13 items

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