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04302015_16_scaffold_324

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Displaying items 1-30 of 51 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_324_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..599)
DNA (597bp) protein (199aa)
hypothetical protein; K07178 RIO kinase 1 [EC:2.7.11.1]
Putative uncharacterized protein id=1337896 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(599..1999)
DNA (1401bp) protein (467aa)
aspA; aspartate ammonia-lyase (EC:4.2.1.2); K01744 aspartate ammonia-lyase [EC:4.3.1.1]
aspartate ammonia-lyase n=1 Tax=Thiobacillus thioparus RepID=UPI0003639AC0
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2013..2504
DNA (492bp) protein (164aa)
thioredoxin n=1 Tax=Thiobacillus denitrificans RepID=UPI000361117E
thioredoxin
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_324_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2535..3041
DNA (507bp) protein (169aa)
Putative uncharacterized protein id=1368052 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_324_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3041..4309
DNA (1269bp) protein (423aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003611F65
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4306..4824
DNA (519bp) protein (173aa)
RND multidrug efflux membrane fusion protein MexE id=1368054 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RND multidrug efflux membrane fusion protein MexE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_7
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4941..5078)
DNA (138bp) protein (46aa)
Uncharacterized protein n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GN72_CUPNN
hypothetical protein
Tax=CG_Rhodof_02
04302015_16_scaffold_324_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5343..6320)
DNA (978bp) protein (326aa)
Uncharacterized protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AFA1_9PROT rbh
hypothetical protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6348..7472)
DNA (1125bp) protein (375aa)
Putative signal peptide protein id=1312411 bin=GWE1_T_denit_62_9 species=Albidiferax ferrireducens genus=Albidiferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative signal peptide protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_10
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7490..7705)
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037906C3
hypothetical protein
Tax=RBG_16_Gallionellales_57_15_curated
04302015_16_scaffold_324_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7989..8561)
DNA (573bp) protein (191aa)
Chromate reductase, Class I, flavoprotein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F7C0_9PROT
NAD(P)H dehydrogenase (quinone):NADPH-dependent FMN reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_12
unknown

Not on your lists

8837..8989
DNA (153bp) protein (51aa)

This feature has no annotations

04302015_16_scaffold_324_13
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9066..10064
DNA (999bp) protein (333aa)
ABC transporter permease n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B5997B
ABC transporter permease; K02066 putative ABC transport system permease protein
Tax=GWA2_Rhodocyclales_65_20_curated
04302015_16_scaffold_324_14
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10061..10852
DNA (792bp) protein (264aa)
iron ABC transporter ATP-binding protein n=1 Tax=Pseudomonas pelagia RepID=UPI0003A696C8
putative ABC transporter, ATP-binding protein
Tax=GWA2_Rhodocyclales_65_20_curated
04302015_16_scaffold_324_15
GWA2_Rhodocyclales_65_20_curated, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10842..11444
DNA (603bp) protein (201aa)
ABC transport system substrate-binding protein n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P7B2_AZOS1
ABC transporter substrate-binding protein; K02067 putative ABC transport system substrate-binding protein
Tax=GWA2_Rhodocyclales_65_20_curated
04302015_16_scaffold_324_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11431..12786
DNA (1356bp) protein (452aa)
sorbosone dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI000377564A
L-sorbosone dehydrogenase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12851..13408)
DNA (558bp) protein (186aa)
Putative oxidase id=1342610 bin=GWE1_T_denit_62_9 species=mine drainage metagenome genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Alternative oxidase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_18
RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13492..14478)
DNA (987bp) protein (329aa)
Tax=RIFOXYD12_FULL_Deltaproteobacteria_50_9_curated
04302015_16_scaffold_324_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14487..15011)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense MSR-1 v2 RepID=V6F4K1_9PROT
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15140..16210)
DNA (1071bp) protein (357aa)
NADPH-dependent FMN reductase id=1328173 bin=GWE1_T_denit_62_9 species=Nitrosomonas sp. genus=Nitrosomonas taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
NADPH-dependent FMN reductase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_21
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16445..17764)
DNA (1320bp) protein (440aa)
Sodium/hydrogen exchanger n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YM3_RHOFD
sodium/hydrogen exchanger
Sodium/hydrogen exchanger {ECO:0000313|EMBL:ABD69130.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_16_scaffold_324_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18271..18375
DNA (105bp) protein (35aa)
Uncharacterized protein n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LRD7_DESBD
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18484..19308
DNA (825bp) protein (275aa)
alpha/beta hydrolase fold protein (EC:1.11.1.10); K00433 chloride peroxidase [EC:1.11.1.10] rbh
Non-heme chloroperoxidase n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YMF5_9DELT rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19544..19927
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037BE557
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_324_25
Herbaspirillum sp. TSA66, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20041..20397
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EX69_EMTOG
Uncharacterized protein {ECO:0000313|EMBL:KIF79966.1}; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;"
hypothetical protein
04302015_16_scaffold_324_26
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20505..21026
DNA (522bp) protein (174aa)
Putative uncharacterized protein n=2 Tax=Acidithiobacillus ferrooxidans RepID=B7J6T7_ACIF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH83245.1}; Flags: Precursor;; TaxID=380394 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 53993) (Leptospirillum; ferrooxidans (ATCC 53993)).;"
04302015_16_scaffold_324_27
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21513..21920
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI000381BDA1
hypothetical protein; K00389 putative membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ADY52797.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
04302015_16_scaffold_324_28
BJP_IG2103_Dechloromonas_63_51, Dechloromonas, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21941..22603
DNA (663bp) protein (221aa)
Probable cytochrome C n=1 Tax=Bordetella parapertussis (strain Bpp5) RepID=K0MJE1_BORPB
cytochrome C
Tax=BJP_IG2103_Dechloromonas_63_51
04302015_16_scaffold_324_29
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22600..23616
DNA (1017bp) protein (339aa)
Putative cytochrome c n=1 Tax=Burkholderia cepacia GG4 RepID=J7J5W7_BURCE rbh
cytochrome c rbh
Putative cytochrome c {ECO:0000313|EMBL:AFQ49627.1}; TaxID=1009846 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia GG4.;"
04302015_16_scaffold_324_30
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23613..25109
DNA (1497bp) protein (499aa)
putative cytochrome C subunit protein; K00404 cytochrome c oxidase cbb3-type subunit I [EC:1.9.3.1] rbh
cytochrome C subunit protein n=1 Tax=Gluconacetobacter oboediens RepID=UPI000237E1DE rbh
Cytochrome C and Quinol oxidase polypeptide I family protein {ECO:0000313|EMBL:AJZ56415.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
Displaying items 1-30 of 51 in total

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