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04302015_16_scaffold_459

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_459_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..239)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372F766
MarR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

518..1522
DNA (1005bp) protein (335aa)
PfkB; K00847 fructokinase [EC:2.7.1.4] id=12493773 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
PfkB domain-containing protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_3
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1519..3678
DNA (2160bp) protein (720aa)
Putative sucrose phosphate synthase with sucrose phosphatase and glycosyltransferase domains n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GWD8_9GAMM rbh
sucrose phosphate synthase rbh
Putative sucrose phosphate synthase with sucrose phosphatase and glycosyltransferase domains {ECO:0000313|EMBL:AGA90142.1}; Flags: Precursor;; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thioflavicoccus.;" source="Thioflavicoccus mobilis 8321.;"
04302015_16_scaffold_459_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3679..4545
DNA (867bp) protein (289aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Marichromatium purpuratum 984 RepID=F9U4K7_MARPU rbh
HAD-superfamily hydrolase rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_5
CG_Rhodof_02, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4565..6517
DNA (1953bp) protein (651aa)
alpha amylase; K05341 amylosucrase [EC:2.4.1.4] rbh
Alpha amylase catalytic region n=1 Tax=Desulfomicrobium baculatum (strain DSM 4028 / VKM B-1378) RepID=C7LUS4_DESBD rbh
Tax=CG_Rhodof_02
04302015_16_scaffold_459_6
GWE2_Gallionellales_58_10_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6552..7445
DNA (894bp) protein (298aa)
Uncharacterized protein id=1961505 bin=GWE2_Gallionellales_58_10 species=Sulfuricella denitrificans genus=Sulfuricella taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE2_Gallionellales_58_10 organism_group=Betaproteobacteria organism_desc=Good, but small rbh
mechanosensitive ion channel; K03442 small conductance mechanosensitive channel
Tax=GWE2_Gallionellales_58_10_curated
04302015_16_scaffold_459_7
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7580..7762
DNA (183bp) protein (61aa)
Putative uncharacterized protein id=1372110 bin=GWE1_T_denit_62_9 species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RBG_16_Gallionellales_57_15_curated
04302015_16_scaffold_459_8
unknown

Not on your lists

7904..8071
DNA (168bp) protein (56aa)

This feature has no annotations

04302015_16_scaffold_459_9
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8131..9483)
DNA (1353bp) protein (451aa)
Cl-channel voltage-gated family protein id=12496868 bin=THIO_MID species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
Chloride channel protein {ECO:0000313|EMBL:GAO35296.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
Cl-channel voltage-gated family protein rbh
04302015_16_scaffold_459_10
R_Betaproteobacteria_63_19, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9699..10880
DNA (1182bp) protein (394aa)
acetate kinase; K00925 acetate kinase [EC:2.7.2.1] rbh
Acetate kinase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2J1C3_RHOP2 rbh
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_63_19_curated
04302015_16_scaffold_459_11
Ferriphaselus amnicola, Ferriphaselus, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10937..13321
DNA (2385bp) protein (795aa)
Probable phosphoketolase {ECO:0000256|HAMAP-Rule:MF_01403}; EC=4.1.2.- {ECO:0000256|HAMAP-Rule:MF_01403};; TaxID=1188319 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Ferriphaselus.;" source="Ferriphaselus amnicola.;"
phosphoketolase (EC:4.1.2.9); K01621 phosphoketolase [EC:4.1.2.9]
Probable phosphoketolase n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IUY2_9GAMM
04302015_16_scaffold_459_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13299..15821
DNA (2523bp) protein (841aa)
Glycogen phosphorylase (EC:2.4.1.1) rbh
glycogen phosphorylase n=1 Tax=Lamprocystis purpurea RepID=UPI00036AC726 rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15832..16194)
DNA (363bp) protein (121aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035CB1B7
molybdenum-pterin-binding protein, molybdate transport system regulatory protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16275..16733
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036A486F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16758..17954)
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035E3698 rbh
hypothetical protein; K07234 uncharacterized protein involved in response to NO
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17988..18305)
DNA (318bp) protein (106aa)
sulfite reductase subunit gamma n=1 Tax=Thiobacillus denitrificans RepID=UPI00036487F8
putative sulfite reductase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18357..19895)
DNA (1539bp) protein (513aa)
sulfide-quinone reductase (EC:1.-.-.-); K00540 [EC:1.-.-.-]
Sulfide:quinone oxidoreductase id=1329773 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_459_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19922..20605)
DNA (684bp) protein (228aa)
narI; respiratory nitrate reductase, gamma chain (EC:1.7.99.4)
Nitrate reductase, gamma subunit id=1329774 bin=GWE1_T_denit_62_9 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_459_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20630..21286)
DNA (657bp) protein (219aa)
narJ; respiratory nitrate reductase subunit delta (EC:1.7.99.4); K00373 nitrate reductase 1, delta subunit
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000364982B rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_459_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21299..22846)
DNA (1548bp) protein (516aa)
narH; nitrate reductase 1, Fe-S (beta) subunit (EC:1.7.99.4); K00371 nitrate reductase 1, beta subunit [EC:1.7.99.4] rbh
Nitrate reductase, beta subunit id=1329776 bin=GWE1_T_denit_62_9 species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_459_21
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22843..25854)
DNA (3012bp) protein (1004aa)
narG2; respiratory nitrate reductase alpha chain (NarG) (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
Nitrate reductase 1, alpha chain id=1329777 bin=GWE1_T_denit_62_9 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_459_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25815..26507)
DNA (693bp) protein (231aa)
narG; nitrate reductase 1, subunit alpha (EC:1.7.99.4); K00370 nitrate reductase 1, alpha subunit [EC:1.7.99.4]
nitrate reductase A subunit alpha n=1 Tax=Thiobacillus denitrificans RepID=UPI0003787A5D
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_459_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26607..28217)
DNA (1611bp) protein (537aa)
Nitrate/nitrite antiporter id=1329778 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Nitrate/nitrite transporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28276..29541)
DNA (1266bp) protein (422aa)
Nitrate/proton symporter n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJ16_THIDA
nitrate/proton symporter; K02575 MFS transporter, NNP family, nitrate/nitrite transporter
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_25
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29934..30365
DNA (432bp) protein (144aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI000379FC37
putative cytochrome c-type protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_459_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30470..31075)
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037F405F
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31075..31440)
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D1759
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_28
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31437..31709)
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003776AC7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_29
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31715..32236)
DNA (522bp) protein (174aa)
NosL n=1 Tax=Thiobacillus denitrificans RepID=UPI0003738E3B
putative nitrous oxide reduction lipoprotein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_459_30
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32233..33048)
DNA (816bp) protein (272aa)
ABC transporter permease n=1 Tax=Thiobacillus thioparus RepID=UPI0003742648 rbh
ABC transporter transmembrane protein; K01992 ABC-2 type transport system permease protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying items 1-30 of 41 in total

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