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04302015_16_scaffold_565

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Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_565_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..1726
DNA (1725bp) protein (575aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003644CFC rbh
response regulator receiver:tetratricopeptide TPR_4
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1743..2396
DNA (654bp) protein (218aa)
sensor histidine kinase (EC:2.7.3.-)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000370A87F
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2567..2875
DNA (309bp) protein (103aa)
ATP-dependent Clp protease adapter protein ClpS id=1335682 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ATP-dependent Clp protease adaptor protein ClpS; K06891 ATP-dependent Clp protease adaptor protein ClpS
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2876..5131
DNA (2256bp) protein (752aa)
ATP-dependent Clp protease ATP-binding subunit ClpA (EC:3.4.21.92); K03694 ATP-dependent Clp protease ATP-binding subunit ClpA
ATP-dependent Clp protease, ATP-binding subunit id=1335681 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5285..5800
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003708CD7
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_565_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6313..7734
DNA (1422bp) protein (474aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22); K16011 mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase [EC:2.7.7.13 5.3.1.8]
mannose-1-phosphate guanylyltransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037CD054
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8039..8353
DNA (315bp) protein (105aa)
Flagellar transcriptional regulator FlhD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SJG8_THIDA
transcriptional activator FlhD; K02403 flagellar transcriptional activator FlhD
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8384..8935
DNA (552bp) protein (184aa)
transcriptional activator FlhC; K02402 flagellar transcriptional activator FlhC id=12493987 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
transcriptional activator FlhC; K02402 flagellar transcriptional activator FlhC rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8954..9715
DNA (762bp) protein (254aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CEF9C
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_565_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9843..10703
DNA (861bp) protein (287aa)
flagellar motor protein MotA n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A9490
flagellar motor protein MotA; K02556 chemotaxis protein MotA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10744..11682
DNA (939bp) protein (313aa)
Outer membrane chemotaxis MotB protein id=1332262 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
motB; flagellar motor protein MotB; K02557 chemotaxis protein MotB rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11830..12972
DNA (1143bp) protein (381aa)
flagellar biosynthesis protein FlhB n=1 Tax=Thiobacillus denitrificans RepID=UPI00036ADE0A
flagellar biosynthetic protein FlhB; K02401 flagellar biosynthetic protein FlhB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12969..14819
DNA (1851bp) protein (617aa)
flagellar biosynthesis protein FlhA n=1 Tax=Thiobacillus denitrificans RepID=UPI00037DF65E
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15116..16168
DNA (1053bp) protein (351aa)
flagellar biosynthesis regulator FlhF n=1 Tax=Thiobacillus thioparus RepID=UPI00037C9F8B
flhF; flagellar biosynthesis regulator FlhF; K02404 flagellar biosynthesis protein FlhF
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16161..16367
DNA (207bp) protein (69aa)
Putative flagellar biosynthesis protein FlhG id=1357064 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16334..16978
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003690723
putative flagellar biosynthesis protein FlhG; K04562 flagellar biosynthesis protein FlhG
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16981..17712
DNA (732bp) protein (244aa)
RNA polymerase sigma factor id=1357065 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
RNA polymerase sigma-70 factor; K02405 RNA polymerase sigma factor for flagellar operon FliA
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17694..18431
DNA (738bp) protein (246aa)
flagellar motor protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00038245BC
motC; flagellar motor protein; K02556 chemotaxis protein MotA
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_565_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18431..19228
DNA (798bp) protein (266aa)
flagellar motor protein MotD; K02557 chemotaxis protein MotB id=12493964 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
flagellar motor protein MotD; K02557 chemotaxis protein MotB
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19305..21692
DNA (2388bp) protein (796aa)
PIM1 peptidase (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53]
Lon protease n=1 Tax=Thiobacillus thioparus RepID=UPI000366D8FE
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21709..21939)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ24 RepID=UPI00036F9DF7
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_22
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22183..22794)
DNA (612bp) protein (204aa)
Putative uncharacterized protein id=1357069 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_23
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22805..23038)
DNA (234bp) protein (78aa)
hypothetical protein; K04085 tRNA 2-thiouridine synthesizing protein A [EC:2.8.1.-]
Putative uncharacterized protein id=1357070 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_24
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23224..23829)
DNA (606bp) protein (202aa)
Possible Transcriptional Regulator, TetR family id=1357071 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TetR family transcriptional regulator
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_25
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23943..24782
DNA (840bp) protein (280aa)
segregation and condensation protein A n=1 Tax=Thiobacillus denitrificans RepID=UPI00036CBED9
condensin subunit ScpA; K05896 segregation and condensation protein A
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_26
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24763..25449
DNA (687bp) protein (229aa)
chromosome segregation protein ScpB n=1 Tax=Thiobacillus thioparus RepID=UPI0003825B38
condensin subunit ScpB; K06024 segregation and condensation protein B
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_27
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25496..26341
DNA (846bp) protein (282aa)
ribosomal large subunit pseudouridine synthase B (EC:5.4.99.-); K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22]
RNA pseudouridine synthase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003822297
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_565_28
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26352..26990
DNA (639bp) protein (213aa)
hypothetical protein n=1 Tax=Methyloversatilis universalis RepID=UPI00037AFEBB
LuxR family transcriptional regulator
Tax=RBG_16_Betaproteobacteria_58_11_curated
04302015_16_scaffold_565_29
unknown

Not on your lists

comp(27114..27488)
DNA (375bp) protein (125aa)

This feature has no annotations

04302015_16_scaffold_565_30
RBG_16_Betaproteobacteria_58_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27589..27891)
DNA (303bp) protein (101aa)
Rhodanese-like protein n=1 Tax=Acinetobacter baumannii WC-487 RepID=K9BYR8_ACIBA
Rhodanese-related sulfurtransferase
Tax=RBG_16_Betaproteobacteria_58_11_curated
Displaying items 1-30 of 41 in total

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