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04302015_16_scaffold_1201

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Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_1201_1
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..951
DNA (951bp) protein (317aa)
phosphomethylpyrimidine synthase ThiC n=1 Tax=Thiobacillus thioparus RepID=UPI00036C6FEA
thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_1201_2
R_Burkholderiales_57_36, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1288..3897)
DNA (2610bp) protein (870aa)
Sensor diguanylate cyclase/phosphodiesterase, PAS, PAS and PAS domain-containing n=2 Tax=Geobacter metallireducens RepID=Q39R25_GEOMG
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated
04302015_16_scaffold_1201_3
Nitrococcus mobilis, Nitrococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3902..5080)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BUY8_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:EAR20502.1}; TaxID=314278 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Nitrococcus.;" source="Nitrococcus mobilis Nb-231.;"
hypothetical protein rbh
04302015_16_scaffold_1201_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5728..6510
DNA (783bp) protein (261aa)
undecaprenyl-diphosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
UDP pyrophosphate phosphatase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036B838C
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_1201_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6515..7228)
DNA (714bp) protein (238aa)
Uncharacterized protein id=1304142 bin=GWE1_T_denit_62_9 species=Pseudomonas pseudoalcaligenes genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_1201_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7263..7790)
DNA (528bp) protein (176aa)
Two Component Transcriptional Regulator, Fis family id=1304141 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
two component Fis family transcriptional regulator; K15012 two-component system, response regulator RegA
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_1201_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7787..8902)
DNA (1116bp) protein (372aa)
periplasmic sensor signal transduction histidine kinase; K15011 two-component system, sensor histidine kinase RegB [EC:2.7.13.3]
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI000361B9D3
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_1201_8
CG_Hydro_01, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9205..9660)
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003715CF6
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein
Tax=CG_Hydro_01
04302015_16_scaffold_1201_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9844..10545)
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003715CF6
oprC; TonB-dependent receptor protein; K02014 iron complex outermembrane recepter protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_1201_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10712..11170
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FCBAD
hypothetical protein; K09796 hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_1201_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11172..11942)
DNA (771bp) protein (257aa)
Putative uncharacterized protein id=1304137 bin=GWE1_T_denit_62_9 species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein; K09929 hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_1201_12
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11908..12228)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037475DA
hypothetical protein; K09930 hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_1201_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12696..12944)
DNA (249bp) protein (83aa)
Putative uncharacterized protein id=1304135 bin=GWE1_T_denit_62_9 species=Neptuniibacter caesariensis genus=Neptuniibacter taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_1201_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13026..13283)
DNA (258bp) protein (86aa)
Putative uncharacterized protein id=1304134 bin=GWE1_T_denit_62_9 species=unknown genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_1201_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13280..13852)
DNA (573bp) protein (191aa)
RNA polymerase sigma factor id=1304133 bin=GWE1_T_denit_62_9 species=unknown genus=Methylovorus taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_1201_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13987..14409
DNA (423bp) protein (141aa)
heat shock protein Hsp20; K13993 HSP20 family protein id=12496218 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
molecular chaperone; K13993 HSP20 family protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_1201_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14492..15373
DNA (882bp) protein (294aa)
N-acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] id=12496219 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria rbh
N-acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8]
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_1201_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15427..15663
DNA (237bp) protein (79aa)
hypothetical protein id=12493654 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 18 items

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