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04302015_16_scaffold_154

Search features with annotation key words

Displaying items 1-30 of 76 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_154_1
unknown

Not on your lists

2..91
DNA (90bp) protein (30aa)

This feature has no annotations

04302015_16_scaffold_154_2
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

438..764
DNA (327bp) protein (109aa)
Regulatory protein ArsR n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FKU3_9BACT
Regulatory protein ArsR {ECO:0000313|EMBL:EJF10966.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
regulatory protein ArsR
04302015_16_scaffold_154_3
Fluviicola taffensis, Fluviicola, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

754..1740
DNA (987bp) protein (329aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Fluviicola taffensis (strain DSM 16823 / RW262 / RW262) RepID=F2IH14_FLUTR rbh
Activator of Hsp90 ATPase 1 family protein rbh
Activator of Hsp90 ATPase 1 family protein {ECO:0000313|EMBL:AEA45828.1}; TaxID=755732 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Cryomorphaceae; Fluviicola.;" source="Fluviicola taffensis (strain DSM 16823 / RW262 / RW262).;"
04302015_16_scaffold_154_4
Flavobacterium columnare, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

1800..2900
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87) RepID=G8X514_FLACA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AEW86830.1}; TaxID=1041826 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium columnare (strain ATCC 49512 / CIP 103533 / TG 44/87).;"
04302015_16_scaffold_154_5
BJP_IG2103_Bacteroidetes_41_9, Bacteroidetes, Bacteria

Not on your lists

3063..3557
DNA (495bp) protein (165aa)
hypothetical protein n=1 Tax=Flavobacterium sp. SCGC AAA160-P02 RepID=UPI00035D93A6
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_41_9
04302015_16_scaffold_154_6
unknown

Not on your lists

comp(3467..3805)
DNA (339bp) protein (113aa)

This feature has no annotations

04302015_16_scaffold_154_7
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

3819..4247
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KSU8_SOLCM
hypothetical protein
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_16_scaffold_154_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4338..5627
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037C48C3 rbh
amidohydrolase rbh
Amidohydrolase {ECO:0000313|EMBL:ACT93628.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
04302015_16_scaffold_154_9
[Bacillus] selenitireducens, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

5759..6109
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10) RepID=D6XY56_BACIE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADH98129.1}; TaxID=439292 species="Bacteria; Firmicutes; Bacilli; Bacillales; Sporolactobacillaceae; unclassified Sporolactobacillaceae.;" source="Bacillus selenitireducens (strain ATCC 700615 / DSM 15326 / MLS10).;"
04302015_16_scaffold_154_10
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6811..7716
DNA (906bp) protein (302aa)
Band 7 protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GSI2_9SPHI rbh
Band 7 protein {ECO:0000313|EMBL:EOR94520.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
hypothetical protein rbh
04302015_16_scaffold_154_11
GWA2_Bacteroidetes_40_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7988..8518
DNA (531bp) protein (177aa)
redoxin domain-containing protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15]
Redoxin domain protein id=3423715 bin=GWC2_Bacteroidetes_40_22 species=Cyclobacterium marinum genus=Cyclobacterium taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
Tax=GWA2_Bacteroidetes_40_15_curated
04302015_16_scaffold_154_12
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8559..9398
DNA (840bp) protein (280aa)
hypothetical protein; K06177 tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29] rbh
Uncharacterized protein n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FIC5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EJF10071.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp. BAB1700.;"
04302015_16_scaffold_154_13
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

9418..10005
DNA (588bp) protein (196aa)
Putative transcriptional regulator, Crp/Fnr family n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CF76_SPHS2
Crp/Fnr family transcriptional regulator
Tax=BJP_IG2103_Bacteroidetes_37_22
04302015_16_scaffold_154_14
BJP_IG2103_Bacteroidetes_37_22, Bacteroidetes, Bacteria

Not on your lists

10117..10653
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C1V4_9FLAO
hypothetical protein
Tax=BJP_IG2103_Bacteroidetes_37_22
04302015_16_scaffold_154_15
Flavobacterium suncheonense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

10737..11447
DNA (711bp) protein (237aa)
Pirin n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRX3_9FLAO rbh
Pirin {ECO:0000313|EMBL:KGO88813.1}; TaxID=1121899 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium suncheonense GH29-5 = DSM 17707.;"
pirin-like protein; K06911 rbh
04302015_16_scaffold_154_16
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

11488..12372
DNA (885bp) protein (295aa)
Pirin C-terminal cupin domain protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EGB0_9FLAO rbh
Pirin C-terminal cupin domain protein {ECO:0000313|EMBL:EGV42524.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
pirin domain protein; K06911 rbh
04302015_16_scaffold_154_17
Cytophaga hutchinsonii, Cytophaga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12378..12779
DNA (402bp) protein (134aa)
OsmC-like family protein n=1 Tax=Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469) RepID=Q11W57_CYTH3
OsmC-like family protein
OsmC-like family protein {ECO:0000313|EMBL:ABG58359.1}; TaxID=269798 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Cytophaga.;" source="Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469).;"
04302015_16_scaffold_154_18
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12937..14115
DNA (1179bp) protein (393aa)
membrane protein n=1 Tax=Pedobacter agri RepID=UPI00029A15E0 rbh
Membrane protein {ECO:0000313|EMBL:KIA94785.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein rbh
04302015_16_scaffold_154_19
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14108..15049
DNA (942bp) protein (314aa)
family 2 glycosyl transferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83] rbh
glycosyl transferase family 2 n=1 Tax=Pedobacter agri RepID=UPI000299D9E0 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:KIA94786.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
04302015_16_scaffold_154_20
Pseudopedobacter saltans, Pseudopedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

15046..15825
DNA (780bp) protein (260aa)
Polysaccharide deacetylase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0S7U3_PEDSD rbh
polysaccharide deacetylase rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:ADY53348.1}; TaxID=762903 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pseudopedobacter.;" source="Pseudopedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 /; LMG 10337 / NBRC 100064 / NCIMB 13643) (Pedobacter saltans).;"
04302015_16_scaffold_154_21
Zobellia galactanivorans, Zobellia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

15955..16449
DNA (495bp) protein (165aa)
DinB family protein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0LBR3_ZOBGA
DinB family protein
DinB family protein {ECO:0000313|EMBL:CAZ96386.1}; TaxID=63186 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zobellia.;" source="Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871; / Dsij).;"
04302015_16_scaffold_154_22
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

16541..16774
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Leeuwenhoekiella blandensis (strain CECT 7118 / CCUG 51940 / MED217) RepID=A3XNI6_LEEBM
Uncharacterized protein {ECO:0000313|EMBL:AKD05395.1}; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter korlensis.;"
hypothetical protein
04302015_16_scaffold_154_23
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


17321..17764
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C175_SPHS2
50S ribosomal protein L13; K02871 large subunit ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
04302015_16_scaffold_154_24
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


17774..18160
DNA (387bp) protein (129aa)
30S ribosomal protein S9 n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4V0_9SPHI
30S ribosomal protein S9 {ECO:0000256|RuleBase:RU003816}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9
04302015_16_scaffold_154_25
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


18179..19036
DNA (858bp) protein (286aa)
30S ribosomal protein S2 n=1 Tax=Pedobacter arcticus RepID=UPI000307A700 rbh
30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
04302015_16_scaffold_154_26
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

19152..19991
DNA (840bp) protein (280aa)
Elongation factor Ts n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XY72_PEDHD rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
translation elongation factor Ts; K02357 elongation factor Ts rbh
04302015_16_scaffold_154_27
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

20047..21156
DNA (1110bp) protein (370aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25); K01443 N-acetylglucosamine-6-phosphate deacetylase [EC:3.5.1.25] rbh
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y4U7_9SPHI rbh
04302015_16_scaffold_154_28
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21188..21895
DNA (708bp) protein (236aa)
uridylate kinase; K09903 uridylate kinase [EC:2.7.4.22] rbh
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197270};; Uridine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_01220}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
Uridylate kinase n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CCS7_SPHS2 rbh
04302015_16_scaffold_154_29
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

21975..22538
DNA (564bp) protein (188aa)
Ribosome-recycling factor n=1 Tax=Pedobacter sp. BAL39 RepID=A6EB51_9SPHI
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
ribosome recycling factor; K02838 ribosome recycling factor
04302015_16_scaffold_154_30
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

22609..24363
DNA (1755bp) protein (585aa)
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GQ86_9SPHI rbh
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EOR94002.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter svalbardensis MN12-7.;"
ABC transporter; K06147 ATP-binding cassette, subfamily B, bacterial rbh
Displaying items 1-30 of 76 in total

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