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04302015_16_scaffold_169

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Displaying items 1-30 of 71 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_169_1
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(197..1180)
DNA (984bp) protein (328aa)
Putative glycerophosphodiester phosphodiesterase n=1 Tax=Pedobacter sp. BAL39 RepID=A6EDZ9_9SPHI rbh
Putative glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EDM36487.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
glycerophosphoryl diester phosphodiesterase
04302015_16_scaffold_169_2
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

1448..2719
DNA (1272bp) protein (424aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XUW6_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU05974.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
04302015_16_scaffold_169_3
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

2787..3371
DNA (585bp) protein (195aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XT30_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:KEQ30790.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4BY.;"
hypothetical protein
04302015_16_scaffold_169_4
Flammeovirgaceae bacterium 311, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3810..4304)
DNA (495bp) protein (165aa)
DinB family protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GGV2_9BACT
Uncharacterized protein {ECO:0000313|EMBL:AHM63402.1}; TaxID=1257021 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; unclassified Flammeovirgaceae.;" source="Flammeovirgaceae bacterium 311.;"
DinB family protein
04302015_16_scaffold_169_5
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4369..5319)
DNA (951bp) protein (317aa)
Regulatory protein DeoR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YFE8_9SPHI rbh
Regulatory protein DeoR {ECO:0000313|EMBL:EHQ27256.1}; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
putative transcriptional regulator rbh
04302015_16_scaffold_169_6
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(5372..7111)
DNA (1740bp) protein (580aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW59_PEDHD rbh
Uncharacterized protein {ECO:0000313|EMBL:ETZ22954.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein rbh
04302015_16_scaffold_169_7
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7122..8075)
DNA (954bp) protein (318aa)
FecR protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW60_PEDHD rbh
Contig83, whole genome shotgun sequence {ECO:0000313|EMBL:KIO75780.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
FecR protein rbh
04302015_16_scaffold_169_8
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8081..8779)
DNA (699bp) protein (233aa)
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW61_PEDHD
RNA polymerase subunit sigma-24 {ECO:0000313|EMBL:ETZ22956.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
RNA polymerase sigma-70 factor
04302015_16_scaffold_169_9
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8831..9481)
DNA (651bp) protein (217aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW63_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ22958.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
04302015_16_scaffold_169_10
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(9550..10689)
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XW64_PEDHD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACU04143.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
04302015_16_scaffold_169_11
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10873..12186
DNA (1314bp) protein (438aa)
Dienelactone hydrolase n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6XTC2_PEDHD rbh
Contig44, whole genome shotgun sequence {ECO:0000313|EMBL:KIO77171.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
Dienelactone hydrolase; K06889 rbh
04302015_16_scaffold_169_12
Cyclobacterium qasimii, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(12257..13660)
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Cyclobacterium qasimii M12-11B RepID=S7VHL6_9BACT rbh
hypothetical protein; K07093 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPR69491.1}; TaxID=641524 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium.;" source="Cyclobacterium qasimii M12-11B.;"
04302015_16_scaffold_169_13
Mucilaginibacter paludis, Mucilaginibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13946..15244
DNA (1299bp) protein (433aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=714943 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Mucilaginibacter.;" source="Mucilaginibacter paludis DSM 18603.;"
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1Y777_9SPHI rbh
ATPase rbh
04302015_16_scaffold_169_14
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15249..16481)
DNA (1233bp) protein (411aa)
Fosmidomycin resistance protein n=1 Tax=Pedobacter agri RepID=UPI00029AEF26 rbh
major facilitator superfamily protein; K08223 MFS transporter, FSR family, fosmidomycin resistance protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACU03816.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290).;"
04302015_16_scaffold_169_15
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16561..17064)
DNA (504bp) protein (168aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GX82_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ24054.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
04302015_16_scaffold_169_16
Flavobacterium sp. F52, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17196..17564)
DNA (369bp) protein (123aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KSW3_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EJG01273.1}; TaxID=1202532 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. F52.;"
hypothetical protein
04302015_16_scaffold_169_17
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17706..18506
DNA (801bp) protein (267aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
tRNA pseudouridine synthase A n=1 Tax=Pedobacter sp. BAL39 RepID=A6EFU7_9SPHI rbh
tRNA pseudouridine synthase A rbh
04302015_16_scaffold_169_18
Fulvivirga imtechensis, Fulvivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18633..19469
DNA (837bp) protein (279aa)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JU69_9BACT rbh
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:ELR71099.1}; TaxID=1237149 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Fulvivirga.;" source="Fulvivirga imtechensis AK7.;"
3-demethylubiquinone-9 3-methyltransferase rbh
04302015_16_scaffold_169_19
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

19502..19957
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LF81_9BACT
Putative hydroxylaminobenzene mutase
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
04302015_16_scaffold_169_20
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

20075..21232
DNA (1158bp) protein (386aa)
L-threonine aldolase (EC:4.1.2.5); K01620 threonine aldolase [EC:4.1.2.5]
L-threonine aldolase n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01X52_SOLUE
Tax=RBG_13_Ignavibacteria_36_8_curated
04302015_16_scaffold_169_21
Vibrio mimicus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21344..21985
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Methylophilus RepID=UPI00035E8777
Uncharacterized protein {ECO:0000313|EMBL:EMB48510.1}; TaxID=1259812 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio mimicus CAIM 602.;"
hypothetical protein
04302015_16_scaffold_169_22

Not on your lists

22214..23641
DNA (1428bp) protein (476aa)
Uncharacterized protein n=1 Tax=Glaciecola agarilytica NO2 RepID=K6WC58_9ALTE rbh
Uncharacterized protein {ECO:0000313|EMBL:KKL90742.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
amidohydrolase rbh
04302015_16_scaffold_169_23
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23713..24915)
DNA (1203bp) protein (401aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTK9_DYAFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT92952.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
04302015_16_scaffold_169_24
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24917..26143)
DNA (1227bp) protein (409aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VTK8_DYAFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ACT92951.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;"
04302015_16_scaffold_169_25
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26407..27423
DNA (1017bp) protein (339aa)
Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZQR4_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EON76422.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
dipeptidylaminopeptidase/acylaminoacyl-peptidase -like protein
04302015_16_scaffold_169_26
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27536..28381
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EGP5_9SPHI rbh
Contig65, whole genome shotgun sequence {ECO:0000313|EMBL:KIO76387.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. NL19.;"
hypothetical protein rbh
04302015_16_scaffold_169_27
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

28467..29144
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEW6_SPHS2
Four helix bundle sensory module for signal transduction {ECO:0000313|EMBL:KHJ37308.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
hypothetical protein
04302015_16_scaffold_169_28
unknown

Not on your lists

comp(29488..29928)
DNA (441bp) protein (147aa)

This feature has no annotations

04302015_16_scaffold_169_29
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(30163..30627)
DNA (465bp) protein (155aa)
Two-component response regulator n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GM21_9SPHI
Hydrogenase transcriptional regulatory protein hupR1 {ECO:0000313|EMBL:KHJ38678.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glucosidilyticus.;"
response regulator receiver protein
04302015_16_scaffold_169_30
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

30941..31594
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VTG5_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EFK57066.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium spiritivorum ATCC 33861.;"
hypothetical protein
Displaying items 1-30 of 71 in total

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