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04302015_16_scaffold_2416

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_2416_1
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(1..1077)
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0ANW2_IGNAJ
Uncharacterized protein {ECO:0000313|EMBL:ETZ24522.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
hypothetical protein
04302015_16_scaffold_2416_2
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

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comp(1067..2470)
DNA (1404bp) protein (468aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) PF42_CHIPD">RepID=C7PF42_CHIPD rbh
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; K03606 putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase rbh
Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
04302015_16_scaffold_2416_3
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2476..3603)
DNA (1128bp) protein (376aa)
Alpha-D-GlcNAc alpha-1,2-L-rhamnosyltransferase {ECO:0000313|EMBL:EON75539.1}; EC=2.4.1.- {ECO:0000313|EMBL:EON75539.1};; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified Cyclobacteriaceae.;" source="Cyclobacteriaceae bacterium AK24.;"
glycosyl transferase n=1 Tax=Pedobacter agri RepID=UPI000299E60F rbh
hypothetical protein rbh
04302015_16_scaffold_2416_4
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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3910..4473
DNA (564bp) protein (188aa)
sigma-70 family RNA polymerase sigma factor n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4E89A
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADZ80570.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobacterium sp. (strain 21).;"
04302015_16_scaffold_2416_5
Chryseobacterium formosense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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4484..4792
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B655CC
Uncharacterized protein {ECO:0000313|EMBL:KFF00766.1}; TaxID=236814 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium formosense.;"
hypothetical protein
04302015_16_scaffold_2416_6
unknown

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4874..5143
DNA (270bp) protein (90aa)

This feature has no annotations

Displaying 6 items

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