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04302015_16_scaffold_229

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Displaying items 1-30 of 98 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_229_1
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108..1115)
DNA (1008bp) protein (336aa)
phosphonate dehydrogenase (EC:1.20.1.1) rbh
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000381B8FF rbh
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_16_scaffold_229_2
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1133..1930)
DNA (798bp) protein (266aa)
phosphate ABC transporter permease n=1 Tax=Thiobacillus denitrificans RepID=UPI00036FC8BA
phosphonate ABC transporter, inner membrane subunit; K02042 phosphonate transport system permease protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_16_scaffold_229_3
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2070..2924)
DNA (855bp) protein (285aa)
phosphate ABC transporter substrate-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003623A03
phosphonate ABC transporter periplasmic phosphonate-binding protein; K02044 phosphonate transport system substrate-binding protein
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_16_scaffold_229_4
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2928..3737)
DNA (810bp) protein (270aa)
phosphonate ABC transporter ATP-binding protein; K02041 phosphonate transport system ATP-binding protein [EC:3.6.3.28]
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037AEC24
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
04302015_16_scaffold_229_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4513..5142)
DNA (630bp) protein (210aa)
Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI37_THIDA rbh
two component LuxR family transcriptional regulator rbh
Two Component Transcriptional Regulator, LuxR family {ECO:0000313|EMBL:AAZ97696.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_229_6
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5126..6934)
DNA (1809bp) protein (603aa)
histidine kinase (EC:2.7.3.-); K10819 histidine kinase rbh
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI36_THIDA rbh
04302015_16_scaffold_229_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6960..7418)
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365E9DA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98497.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_229_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7415..8464)
DNA (1050bp) protein (350aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CE718 rbh
putative cytochrome c rbh
Putative cytochrome c {ECO:0000313|EMBL:AAZ98498.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_229_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8864..10696
DNA (1833bp) protein (611aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00035D3E26 rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_229_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10796..11851
DNA (1056bp) protein (352aa)
Putative uncharacterized protein id=1328059 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
hypothetical protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_11
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11906..17824)
DNA (5919bp) protein (1973aa)
CheA Signal Transduction Histidine Kinases (STHK) id=1328058 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
signal transduction histidine kinase CheA-like protein; K02487 type IV pili sensor histidine kinase and response regulator; K06596 chemosensory pili system protein ChpA (sensor histidine kinase/response regulator) rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17895..20015)
DNA (2121bp) protein (707aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003690CBB rbh
Chemotaxis sensory transducer {ECO:0000313|EMBL:AAZ98502.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
chemotaxis sensory transducer; K02660 twitching motility protein PilJ rbh
04302015_16_scaffold_229_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20078..20590)
DNA (513bp) protein (171aa)
Twitching motility protein PilI id=1346778 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
CheW protein; K02659 twitching motility protein PilI
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20601..20966)
DNA (366bp) protein (122aa)
Response regulator receiver domain protein (CheY) id=1346777 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
response regulator receiver domain-containing protein; K02658 twitching motility two-component system response regulator PilH
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20988..21380)
DNA (393bp) protein (131aa)
Response regulator receiver domain protein (CheY) id=1346776 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
response regulator receiver domain-containing protein; K02657 twitching motility two-component system response regulator PilG
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21562..22464)
DNA (903bp) protein (301aa)
hypothetical protein id=12495276 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_229_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22594..22776)
DNA (183bp) protein (61aa)
rubredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI00037B7278
rubredoxin protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_229_18
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22831..23673
DNA (843bp) protein (281aa)
phosphomethylpyrimidine kinase; K00941 hydroxymethylpyrimidine/phosphomethylpyrimidine kinase [EC:2.7.1.49 2.7.4.7] rbh
Phosphomethylpyrimidine kinase id=1346773 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23690..24325
DNA (636bp) protein (212aa)
thiamine monophosphate synthase (EC:2.5.1.3); K00788 thiamine-phosphate pyrophosphorylase [EC:2.5.1.3]
Thiamine-phosphate synthase id=1346772 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_20
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24322..25599
DNA (1278bp) protein (426aa)
glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8); K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] rbh
glutamate-1-semialdehyde 2,1-aminomutase n=1 Tax=Thiobacillus thioparus RepID=UPI00037F6131 rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_229_21
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25596..26663
DNA (1068bp) protein (356aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E9F0D rbh
hypothetical protein rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_229_22
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26734..29028)
DNA (2295bp) protein (765aa)
thiol:disulfide interchange protein DsbD (EC:1.8.1.8); K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] rbh
thiol:disulfide interchange protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000373D2DB rbh
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_229_23
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29012..29344)
DNA (333bp) protein (111aa)
Divalent cation tolerance protein id=1343288 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
divalent cation tolerance protein; K03926 periplasmic divalent cation tolerance protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_24
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29348..29800
DNA (453bp) protein (151aa)
FxsA protein id=1343289 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
FxsA protein; K07113 UPF0716 protein FxsA
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_25
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29801..30688)
DNA (888bp) protein (296aa)
Putative oxidoreductase protein id=1343290 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
putative oxidoreductase protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_26
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30784..31821
DNA (1038bp) protein (346aa)
CDP-6-deoxy-delta-3,4-glucoseen reductase; K00523 CDP-4-dehydro-6-deoxyglucose reductase [EC:1.17.1.1]
NAD(P)H-flavin reductase id=1343291 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_27
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31838..32356)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000361772F
hypothetical protein
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_28
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32464..33636)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein id=1343293 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
putative porphyrin biosynthesis protein; K02498 HemY protein rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_29
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33636..34682)
DNA (1047bp) protein (349aa)
uroporphyrin-III C-methyltransferase; K02496 uroporphyrin-III C-methyltransferase [EC:2.1.1.107] rbh
Uroporphyrin-III C-methyltransferase id=1343294 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb rbh
Tax=GWE1_Thiobacillus_62_9_curated
04302015_16_scaffold_229_30
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34679..35446)
DNA (768bp) protein (256aa)
uroporphyrinogen-III synthase (EC:4.2.1.75); K01719 uroporphyrinogen-III synthase [EC:4.2.1.75] rbh
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000372750B
Tax=GWE1_Thiobacillus_62_9_curated
Displaying items 1-30 of 98 in total

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