ggKbase home page

04302015_16_scaffold_674

Search features with annotation key words

Displaying 19 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_674_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

04302015_16_scaffold_674_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(646..1098)
DNA (453bp) protein (151aa)
Uncharacterized protein id=1329234 bin=GWE1_T_denit_62_9 species=Cupriavidus necator genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_674_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1378..2598
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360B7F9 rbh
rhodanese-like protein rbh
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_674_4
R_Betaproteobacteria_65_24, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2606..2812)
DNA (207bp) protein (69aa)
Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_65_24_curated
04302015_16_scaffold_674_5
unknown

Not on your lists

2971..3087
DNA (117bp) protein (39aa)

This feature has no annotations

04302015_16_scaffold_674_6
RBG_16_Nitrospirae_43_8_curated, Nitrospirae, Bacteria

Not on your lists

3175..3594
DNA (420bp) protein (140aa)
nth; endonuclease III (EC:4.2.99.18)
Endonuclease III id=4044004 bin=GWF2_Nitrospirae_44_13 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
Tax=RBG_16_Nitrospirae_43_8_curated
04302015_16_scaffold_674_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3721..5133)
DNA (1413bp) protein (471aa)
Uncharacterized protein n=1 Tax=Nitrosospira sp. APG3 RepID=M5DFN5_9PROT
phosphatase-like; K07093
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
04302015_16_scaffold_674_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5416..5913)
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037BBF0A
hypothetical protein
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_674_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5900..6280)
DNA (381bp) protein (127aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003754384
type II secretion system protein G; K02456 general secretion pathway protein G
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_674_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6285..6770)
DNA (486bp) protein (162aa)
GSPG signal peptide protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036E7635
type II secretion system transmembrane protein; K02456 general secretion pathway protein G
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_674_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6777..8699)
DNA (1923bp) protein (641aa)
Type II secretion system protein D n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SIY3_THIDA rbh
type II secretion system protein D; K02453 general secretion pathway protein D rbh
Type II secretion system protein D {ECO:0000313|EMBL:AAZ97392.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_674_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8701..9213)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036BBBDE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97391.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_674_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9210..9740)
DNA (531bp) protein (177aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036C9902
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97390.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_674_14
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9737..10252)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000363C842
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97389.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_674_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10255..11013)
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E9D0F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97388.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_674_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10994..12670)
DNA (1677bp) protein (559aa)
general secretion protein E n=1 Tax=Thiobacillus denitrificans RepID=UPI00035E78D4 rbh
type II secretion system protein E; K02454 general secretion pathway protein E rbh
Type II secretion system protein E {ECO:0000313|EMBL:AAZ97387.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_674_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12667..13851)
DNA (1185bp) protein (395aa)
type II secretion system protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00035EB2C2 rbh
type II secretion system protein F; K02455 general secretion pathway protein F
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
04302015_16_scaffold_674_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14095..14529)
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375187C
type II secretion systen protein G; K02456 general secretion pathway protein G
Type II secretion systen protein G {ECO:0000313|EMBL:AAZ97385.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
04302015_16_scaffold_674_19
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14997..15383
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZ85_RAMTT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEG93255.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
Displaying 19 items

View Taxonomy