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04302015_16_scaffold_758

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_758_1
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28..351)
DNA (324bp) protein (108aa)
Integration host factor subunit alpha n=1 Tax=beta proteobacterium CB RepID=M1RS92_9PROT
integration host factor, alpha subunit
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_16_scaffold_758_2
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(391..2850)
DNA (2460bp) protein (820aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
Phenylalanine--tRNA ligase beta subunit n=1 Tax=beta proteobacterium CB RepID=M1SG59_9PROT rbh
pheT; phenylalanyl-tRNA synthetase, beta subunit rbh
04302015_16_scaffold_758_3
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(2874..4121)
DNA (1248bp) protein (416aa)
Phenylalanine--tRNA ligase alpha subunit id=4395391 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Phenylalanyl-tRNA synthetase, alpha subunit rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_4
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4417..4875)
DNA (459bp) protein (153aa)
Translation initiation factor IF-3 n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SX34_POLSQ
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus.;"
translation initiation factor IF-3; K02520 translation initiation factor IF-3
04302015_16_scaffold_758_5
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4984..6774)
DNA (1791bp) protein (597aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00184}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
Threonine--tRNA ligase n=1 Tax=beta proteobacterium CB RepID=M1SG54_9PROT
thrS; Threonyl-tRNA synthetase
04302015_16_scaffold_758_6
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6964..8937)
DNA (1974bp) protein (658aa)
(P)ppGpp synthetase I, SpoT/RelA id=4974517 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
(P)ppGpp synthetase I, SpoT/RelA rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_7
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8952..10781)
DNA (1830bp) protein (610aa)
Cation diffusion facilitator family transporter id=4974518 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Cation diffusion facilitator family transporter
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_8
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10849..11499)
DNA (651bp) protein (217aa)
Butyryl-CoA:acetate CoA transferase id=4974519 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
3-oxoacid CoA-transferase, B subunit
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_9
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11538..12236)
DNA (699bp) protein (233aa)
3-oxoacid CoA-transferase, A subunit id=4974520 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
3-oxoacid CoA-transferase, A subunit
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_10
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12446..14116
DNA (1671bp) protein (557aa)
Electron-transferring-flavoprotein dehydrogenase id=4974521 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Electron-transferring-flavoprotein dehydrogenase
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_11
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14121..15275)
DNA (1155bp) protein (385aa)
Major facilitator superfamily MFS_1 id=4974522 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
major facilitator transporter
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_12
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15305..15844)
DNA (540bp) protein (180aa)
Chorismate synthase
Chorismate synthase id=4974523 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_13
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15904..16389)
DNA (486bp) protein (162aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605};; 5-enolpyruvylshikimate-3-phosphate phospholyase {ECO:0000256|HAMAP-Rule:MF_00300}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
Chorismate synthase n=1 Tax=beta proteobacterium CB RepID=M1T2Y7_9PROT
Chorismate synthase
04302015_16_scaffold_758_14
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16441..16896)
DNA (456bp) protein (152aa)
CBS domain containing protein id=4974524 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
CBS domain-containing protein
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_15
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16975..17823)
DNA (849bp) protein (283aa)
tRNA-processing RNAse BN id=4974525 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Putative ribonuclease BN rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_16
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17854..18456
DNA (603bp) protein (201aa)
Flavoprotein WrbA id=4974526 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Flavoprotein WrbA rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_17
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18459..18860
DNA (402bp) protein (134aa)
Membrane protein-like protein n=1 Tax=beta proteobacterium CB RepID=M1SMW5_9PROT
Putative membrane protein {ECO:0000313|EMBL:AKD25252.1}; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus.;"
Membrane protein-like protein
04302015_16_scaffold_758_18
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18986..19174
DNA (189bp) protein (63aa)
hypothetical protein
hypothetical protein id=4974528 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_19
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19208..20419)
DNA (1212bp) protein (404aa)
Putative membrane protein n=1 Tax=beta proteobacterium CB RepID=M1SUT9_9PROT rbh
hypothetical protein rbh
Putative membrane protein {ECO:0000313|EMBL:AGG33391.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_16_scaffold_758_20
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20555..20872
DNA (318bp) protein (106aa)
Putative uncharacterized protein id=4974530 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Serine/threonine protein kinase
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_21
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20899..21672
DNA (774bp) protein (258aa)
Putative uncharacterized protein id=4974531 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_22
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21674..21934)
DNA (261bp) protein (87aa)
hypothetical protein
Putative uncharacterized protein id=4974533 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_23
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21942..22661)
DNA (720bp) protein (240aa)
Putative lipoprotein id=4974534 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Putative lipoprotein rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_24
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23156..23533
DNA (378bp) protein (126aa)
Carboxymuconolactone decarboxylase n=1 Tax=beta proteobacterium CB RepID=M1SG38_9PROT
Carboxymuconolactone decarboxylase
Carboxymuconolactone decarboxylase {ECO:0000313|EMBL:AGG33384.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_16_scaffold_758_25
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23542..24150)
DNA (609bp) protein (203aa)
Glutathione S-transferase, N-terminal domain protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=A4SW97_POLSQ
glutathione S-transferase domain-containing protein
Glutathione S-transferase, N-terminal domain protein {ECO:0000313|EMBL:ABP33761.1}; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;"
04302015_16_scaffold_758_26
unknown

Not on your lists

comp(24156..24305)
DNA (150bp) protein (50aa)

This feature has no annotations

04302015_16_scaffold_758_27
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24542..25300
DNA (759bp) protein (253aa)
carbonic anhydrase; K01673 carbonic anhydrase [EC:4.2.1.1]
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="Pusillimonas sp. (strain T7-7).;"
Carbonic anhydrase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GSS2_PUSST
04302015_16_scaffold_758_28
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25405..26733
DNA (1329bp) protein (443aa)
C4-dicarboxylate transport protein n=1 Tax=Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 / CIP 109841 / QLW-P1DMWA-1) RepID=DCTA_POLSQ rbh
C4-dicarboxylate transporter DctA; K11103 aerobic C4-dicarboxylate transport protein rbh
C4-dicarboxylate transport protein {ECO:0000255|HAMAP-Rule:MF_01300}; TaxID=312153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus (strain DSM 18221 /; CIP 109841 / QLW-P1DMWA-1).;"
04302015_16_scaffold_758_29
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27370..27810)
DNA (441bp) protein (147aa)
Putative uncharacterized protein id=4974536 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_758_30
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28149..28676
DNA (528bp) protein (176aa)
Putative uncharacterized protein id=4974537 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
hypothetical protein
Tax=GWA2_Polynucleobacter_45_21_curated
Displaying 30 items

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