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04302015_16_scaffold_1031

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_1031_1
Nitrosospira multiformis, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

196..426
DNA (231bp) protein (77aa)
Transcriptional regulator/antitoxin, MazE n=1 Tax=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) RepID=Q2YAD3_NITMU
transcriptional regulator/antitoxin, MazE; K07172 antitoxin
Transcriptional regulator/antitoxin, MazE {ECO:0000313|EMBL:ABB74288.1}; TaxID=323848 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849).;"
04302015_16_scaffold_1031_2
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

416..820
DNA (405bp) protein (135aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp. T08.;"
PilT protein domain protein n=1 Tax=Methylobacter tundripaludum SV96 RepID=G3IS82_9GAMM
twitching motility protein PilT
04302015_16_scaffold_1031_3
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(850..3441)
DNA (2592bp) protein (864aa)
RNA polymerase sigma factor id=1698071 bin=GWA2_Polynucleobacter_45_21 species=Polynucleobacter necessarius genus=Polynucleobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
RNA polymerase sigma-70 subunit RpoD; K03086 RNA polymerase primary sigma factor rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1031_4
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3562..5523)
DNA (1962bp) protein (654aa)
DNA primase id=1698072 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
DNA primase rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1031_5
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5559..6005)
DNA (447bp) protein (149aa)
GatB/Yqey domain protein id=1698073 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
GatB/Yqey domain protein
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1031_6
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6123..6335)
DNA (213bp) protein (71aa)
rpsU; ribosomal protein S21
30S ribosomal protein S21 id=1698074 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_16_scaffold_1031_7
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


6413..7486
DNA (1074bp) protein (358aa)
Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp id=1698075 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
metalloendopeptidase glycoprotease family rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1031_8
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7479..8306)
DNA (828bp) protein (276aa)
GTP cyclohydrolase folE2 id=1698076 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
GTP cyclohydrolase folE2 rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1031_9
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8332..10248)
DNA (1917bp) protein (639aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=beta proteobacterium CB RepID=M1SIQ3_9PROT rbh
deoxyxylulose-5-phosphate synthase rbh
04302015_16_scaffold_1031_10
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10265..11176)
DNA (912bp) protein (304aa)
Polyprenyl synthetase n=1 Tax=beta proteobacterium CB RepID=M1RUL6_9PROT rbh
Polyprenyl synthetase rbh
Polyprenyl synthetase {ECO:0000313|EMBL:AGG34260.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_16_scaffold_1031_11
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11190..11423)
DNA (234bp) protein (78aa)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
exonuclease VII, small subunit
Exodeoxyribonuclease 7 small subunit id=1698079 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
04302015_16_scaffold_1031_12
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11629..12594
DNA (966bp) protein (322aa)
Rieske (2Fe-2S) domain protein id=1698080 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Rieske (2Fe-2S) domain-containing protein rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1031_13
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12628..13320
DNA (693bp) protein (231aa)
Sulfurtransferase id=1698081 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
3-mercaptopyruvate sulfurtransferase rbh
Tax=GWA2_Polynucleobacter_45_21_curated
Displaying 13 items

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