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04302015_16_scaffold_1445

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_1445_1
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..233)
DNA (231bp) protein (77aa)
Putative uncharacterized protein id=4403219 bin=GWA2_Polynucleobacter_45_21 species=Polynucleobacter necessarius genus=Polynucleobacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_2
Thioalkalivibrio nitratireducens, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214..486)
DNA (273bp) protein (91aa)
Uncharacterized protein n=2 Tax=Thioalkalivibrio RepID=L0DS24_THIND
protein of unknown function DUF497
Uncharacterized protein {ECO:0000313|EMBL:AGA32369.1}; TaxID=1255043 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioalkalivibrio nitratireducens (strain DSM 14787 / UNIQEM 213 /; ALEN2).;"
04302015_16_scaffold_1445_3
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

702..1199
DNA (498bp) protein (166aa)
SOS response UmuD protein, Serine peptidase, MEROPS family S24 id=4403218 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Putative prophage repressor
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_4
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1196..2497
DNA (1302bp) protein (434aa)
DNA-directed DNA polymerase id=4403217 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
DNA-directed DNA polymerase rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_5
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2535..2666
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=beta proteobacterium CB RepID=M1RT03_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGG33670.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_16_scaffold_1445_6
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2863..3339
DNA (477bp) protein (159aa)
UPF0114 protein Csp_C25760 id=4403196 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_7
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3376..4032)
DNA (657bp) protein (219aa)
Exonuclease, RNase T and DNA polymerase III id=4403194 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Exonuclease, RNase T and DNA polymerase III rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_8
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4040..4357)
DNA (318bp) protein (106aa)
Putative uncharacterized protein id=4403192 bin=GWA2_Polynucleobacter_45_21 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
hypothetical protein
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_9
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5187..6854
DNA (1668bp) protein (556aa)
DNA polymerase III, subunits gamma and tau n=1 Tax=beta proteobacterium CB RepID=M1SVQ4_9PROT rbh
DNA polymerase III, subunits gamma and tau rbh
DNA polymerase III, subunits gamma and tau {ECO:0000313|EMBL:AGG33661.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_16_scaffold_1445_10
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6915..7238
DNA (324bp) protein (108aa)
Nucleoid-associated protein Pnec_0645 id=4403188 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Nucleoid-associated protein CL55_00012050 {ECO:0000256|HAMAP-Rule:MF_00274}; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus.;"
hypothetical protein
04302015_16_scaffold_1445_11
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7260..7874
DNA (615bp) protein (205aa)
Recombination protein RecR id=4403186 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
recR; Recombination protein recR rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_12
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8186..9649
DNA (1464bp) protein (488aa)
Outer membrane efflux protein id=4403179 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Outer membrane efflux protein rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_13
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9737..10930
DNA (1194bp) protein (398aa)
Efflux transporter, RND family, MFP subunit id=4403177 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
RND family efflux transporter MFP subunit rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_14
Ralstonia sp. AU12-08, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10931..13801
DNA (2871bp) protein (957aa)
Metal transporter CzcA n=1 Tax=Ralstonia sp. AU12-08 RepID=S9S7C3_9RALS rbh
Metal transporter CzcA {ECO:0000313|EMBL:EPY00033.1}; TaxID=1235457 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia sp. AU12-08.;"
czcA; Heavy metal efflux pump CzcA (cobalt-zinc-cadmium resistance protein); K15726 cobalt-zinc-cadmium resistance protein CzcA rbh
04302015_16_scaffold_1445_15
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13848..14642
DNA (795bp) protein (265aa)
5'-nucleotidase SurE id=4403173 bin=GWA2_Polynucleobacter_45_21 species=unknown genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
stationary-phase survival protein SurE rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_16
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14639..15295
DNA (657bp) protein (219aa)
Protein-L-isoaspartate O-methyltransferase id=4403171 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
Protein-L-isoaspartate O-methyltransferase rbh
Tax=GWA2_Polynucleobacter_45_21_curated
04302015_16_scaffold_1445_17
beta proteobacterium CB, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15292..16062
DNA (771bp) protein (257aa)
Peptidase M23B n=1 Tax=beta proteobacterium CB RepID=M1RSY9_9PROT rbh
Peptidase M23B rbh
Peptidase M23B {ECO:0000313|EMBL:AGG33650.1}; TaxID=543913 species="Bacteria; Proteobacteria; Betaproteobacteria.;" source="beta proteobacterium CB.;"
04302015_16_scaffold_1445_18
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16097..16918
DNA (822bp) protein (274aa)
Putative 3'-5' exonuclease related to the exonuclease domain of PolB {ECO:0000313|EMBL:AKD25528.1}; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus.;"
PolB exonuclease domain-like 3'-5' exonuclease id=4403166 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria rbh
3'-5' exonuclease rbh
04302015_16_scaffold_1445_19
Polynucleobacter necessarius, Polynucleobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16911..17138
DNA (228bp) protein (76aa)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01010}; TaxID=576611 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Polynucleobacter.;" source="Polynucleobacter necessarius subsp. asymbioticus.;"
RNA methyltransferase; K03215 23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD id=4403164 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria
Displaying 19 items

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