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04302015_16_scaffold_1391

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_1391_1
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(203..2194)
DNA (1992bp) protein (664aa)
Threonine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00184}; EC=6.1.1.3 {ECO:0000255|HAMAP-Rule:MF_00184};; Threonyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00184}; Short=ThrRS {ECO:0000255|HAMAP-Rule:MF_00184};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (strain DSM 12444 / F199).;"
thrS; threonyl-tRNA synthetase (EC:3.1.1.- 6.1.1.3); K01868 threonyl-tRNA synthetase [EC:6.1.1.3] rbh
Threonine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=SYT_NOVAD rbh
04302015_16_scaffold_1391_2
Sphingopyxis sp. LC81, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2556..2981
DNA (426bp) protein (142aa)
hypothetical protein n=1 Tax=Sphingomonas sp. Mn802worker RepID=UPI00035F2203
Uncharacterized protein {ECO:0000313|EMBL:KGB56581.1}; TaxID=1502850 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC81.;"
hypothetical protein
04302015_16_scaffold_1391_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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2978..3172
DNA (195bp) protein (65aa)
Putative transcriptional regulator n=1 Tax=Novosphingobium sp. AP12 RepID=J3A148_9SPHN
XRE family transcriptional regulator {ECO:0000313|EMBL:KHS47726.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
XRE family transcriptional regulator; K07729 putative transcriptional regulator
04302015_16_scaffold_1391_4
unknown

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3169..3339
DNA (171bp) protein (57aa)

This feature has no annotations

04302015_16_scaffold_1391_5
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3388..4122
DNA (735bp) protein (245aa)
Alpha/beta hydrolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBW7_NOVAD rbh
Alpha/beta hydrolase {ECO:0000313|EMBL:KHS47725.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
alpha/beta hydrolase rbh
04302015_16_scaffold_1391_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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4130..5050
DNA (921bp) protein (307aa)
Tetratricopeptide TPR_4 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBW6_NOVAD rbh
TPR repeat protein {ECO:0000313|EMBL:KHS47724.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
hypothetical protein rbh
04302015_16_scaffold_1391_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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5047..5316
DNA (270bp) protein (90aa)
Luciferase-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GBW5_NOVAD
Luciferase-like protein {ECO:0000313|EMBL:KHS47723.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
luciferase-like protein
Displaying 7 items

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