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04302015_16_scaffold_1509

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_1509_1
unknown

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comp(2..160)
DNA (159bp) protein (53aa)

This feature has no annotations

04302015_16_scaffold_1509_2
Kirrobacter mercurialis, Kirrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(157..891)
DNA (735bp) protein (245aa)
type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2E56B
Uncharacterized protein {ECO:0000313|EMBL:KHL24325.1}; TaxID=1572751 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Kirrobacter.;" source="Kirrobacter mercurialis.;"
hypothetical protein; K12059 conjugal transfer pilus assembly protein TrbC
04302015_16_scaffold_1509_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(904..1926)
DNA (1023bp) protein (341aa)
TraU protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GEJ2_9SPHN rbh
Conjugal transfer pilus assembly protein TraU {ECO:0000313|EMBL:KHS49664.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterraneum.;"
TraU family protein; K12060 conjugal transfer pilus assembly protein TraU rbh
04302015_16_scaffold_1509_4
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1919..2200)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3A8Y8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL28351.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
04302015_16_scaffold_1509_5
Sphingobium herbicidovorans, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2197..2874)
DNA (678bp) protein (226aa)
Type-F conjugative transfer system protein TraW n=1 Tax=Novosphingobium sp. AP12 RepID=J2PLL9_9SPHN
Conjugal transfer protein TraW {ECO:0000313|EMBL:KFG90818.1}; TaxID=1219045 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium herbicidovorans (strain ATCC 700291 / DSM 11019 / NBRC; 16415 / MH) (Sphingomonas herbicidovorans).;"
Type-F conjugative transfer system protein TraW; K12061 conjugal transfer pilus assembly protein TraW
04302015_16_scaffold_1509_6
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2871..3425)
DNA (555bp) protein (185aa)
Conjugal transfer protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7R6_9SPHN
Conjugal transfer protein {ECO:0000313|EMBL:EGD59309.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
type IV secretory pathway protease TraF-like protein; K12062 conjugal transfer pilin signal peptidase TrbI
04302015_16_scaffold_1509_7
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3409..3918)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XE84_NOVAD
hypothetical protein
Conjugal transfer protein {ECO:0000313|EMBL:AAD03956.1}; Flags: Precursor;; TaxID=48935 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans (Sphingomonas aromaticivorans).;"
04302015_16_scaffold_1509_8
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3915..4238)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2PAQ6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EJL24262.1}; Flags: Precursor;; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP12.;"
04302015_16_scaffold_1509_9
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4235..4765)
DNA (531bp) protein (177aa)
Type-IV secretion system protein TraC n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7R9_9SPHN
Type-IV secretion system protein TraC {ECO:0000313|EMBL:EGD59306.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium nitrogenifigens DSM 19370.;"
Type-IV secretion system protein TraC; K12063 conjugal transfer ATP-binding protein TraC
Displaying 9 items

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