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04302015_16_scaffold_725

Search features with annotation key words

Displaying 16 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_725_1
Roya obtusa, Roya, Zygnematales, Zygnemophyceae, Streptophyta, Viridiplantae

Not on your lists

comp(20..541)
DNA (522bp) protein (174aa)
NADH-ubiquinone oxidoreductase chain 6 {ECO:0000256|RuleBase:RU004430}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU004430};; TaxID=104537 species="Eukaryota; Viridiplantae; Streptophyta; Zygnemophyceae; Zygnematales; Mesotaeniaceae; Roya.;" source="Roya obtusa.;"
nad6; NADH dehydrogenase subunit 6; K03884 NADH-ubiquinone oxidoreductase chain 6 [EC:1.6.5.3]
NADH dehydrogenase subunit 6 n=1 Tax=Roya obtusa RepID=U5YEF1_9VIRI
04302015_16_scaffold_725_2
gwf2_TM6_43_87, TM6, Bacteria

Not on your lists


comp(605..1345)
DNA (741bp) protein (247aa)
50S ribosomal protein L2 id=4150468 bin=gwf2_TM6_43_87 species=gwf2_TM6_43_87 genus=gwf2_TM6_43_87 taxon_order=gwf2_TM6_43_87 taxon_class=gwf2_TM6_43_87 phylum=TM6 tax=gwf2_TM6_43_87 organism_group=TM6
50S ribosomal protein L2 {ECO:0000313|EMBL:KKT24113.1}; TaxID=1619086 species="Bacteria; candidate division TM6.;" source="candidate division TM6 bacterium GW2011_GWF2_43_87.;"
rplB; 50S ribosomal protein L2; K02886 large subunit ribosomal protein L2
04302015_16_scaffold_725_3
Bacteriovorax sp. DB6_IX, Bacteriovorax, Bdellovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1363..2034)
DNA (672bp) protein (224aa)
Fumarate hydratase n=1 Tax=Bacteriovorax sp. DB6_IX RepID=T0T571_9DELT
Fumarate hydratase {ECO:0000313|EMBL:EQC50452.1}; TaxID=1353530 species="Bacteria; Proteobacteria; Deltaproteobacteria; Bdellovibrionales; Bacteriovoracaceae; Bacteriovorax.;" source="Bacteriovorax sp. DB6_IX.;"
histone H1
04302015_16_scaffold_725_4
Capsaspora owczarzaki, Capsaspora, Ichthyosporea, Eukaryota

Not on your lists

comp(2164..2955)
DNA (792bp) protein (264aa)
Cytochrome c oxidase subunit 3 n=1 Tax=Capsaspora owczarzaki RepID=M1JZM5_9EUKA rbh
Cytochrome c oxidase subunit 3 {ECO:0000256|RuleBase:RU003375}; TaxID=192875 species="Eukaryota; Ichthyosporea; Capsaspora.;" source="Capsaspora owczarzaki.;"
COX3; cytochrome c oxidase subunit III; K02262 cytochrome c oxidase subunit 3 rbh
04302015_16_scaffold_725_5
unknown

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comp(3284..3526)
DNA (243bp) protein (81aa)

This feature has no annotations

04302015_16_scaffold_725_6
Monosiga brevicollis, Monosiga, Choanoflagellida, Eukaryota

Not on your lists

comp(3670..5079)
DNA (1410bp) protein (470aa)
NADH-ubiquinone oxidoreductase chain 4 {ECO:0000256|RuleBase:RU003297}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU003297};; TaxID=81824 species="Eukaryota; Choanoflagellida; Codonosigidae; Monosiga.;" source="Monosiga brevicollis (Choanoflagellate).;"
nad4, ndhD; nad4; K03881 NADH-ubiquinone oxidoreductase chain 4 [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 4 n=1 Tax=Monosiga brevicollis RepID=Q8HIU9_MONBE rbh
04302015_16_scaffold_725_7
Oscarella carmela, Oscarella, Homosclerophorida, Homoscleromorpha, Porifera, Metazoa

Not on your lists

comp(5339..6277)
DNA (939bp) protein (313aa)
NADH-ubiquinone oxidoreductase chain 1 {ECO:0000256|RuleBase:RU000473}; EC=1.6.5.3 {ECO:0000256|RuleBase:RU000473};; TaxID=386100 species="Eukaryota; Metazoa; Porifera; Homoscleromorpha; Homosclerophorida; Plakinidae; Oscarella.;" source="Oscarella carmela (Sponge).;"
NADH:ubiquinone oxidoreductase subunit 1; K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3]
NADH-ubiquinone oxidoreductase chain 1 n=2 Tax=Oscarella RepID=A2T9U0_9METZ rbh
04302015_16_scaffold_725_8
unknown

Not on your lists

comp(6499..6738)
DNA (240bp) protein (80aa)

This feature has no annotations

04302015_16_scaffold_725_9
unknown

Not on your lists

comp(6723..7118)
DNA (396bp) protein (132aa)

This feature has no annotations

04302015_16_scaffold_725_10
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7245..7679)
DNA (435bp) protein (145aa)
50S ribosomal protein L6 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R1H4_9FIRM
LSU ribosomal protein L6P
Tax=BJP_IG2102_Clostridiales_34_350
04302015_16_scaffold_725_11
Monosiga brevicollis, Monosiga, Choanoflagellida, Eukaryota

Not on your lists

comp(7841..8983)
DNA (1143bp) protein (381aa)
Cytochrome b n=1 Tax=Monosiga brevicollis RepID=Q8HIS4_MONBE rbh
Cytochrome b {ECO:0000256|RuleBase:RU000300}; TaxID=81824 species="Eukaryota; Choanoflagellida; Codonosigidae; Monosiga.;" source="Monosiga brevicollis (Choanoflagellate).;"
cob; apocytochrome b; K00412 ubiquinol-cytochrome c reductase cytochrome b subunit
04302015_16_scaffold_725_12

Not on your lists

comp(9202..9528)
DNA (327bp) protein (109aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NUO1 {ECO:0000256|HAMAP-Rule:MF_01394}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
NADH dehydrogenase I subunit A id=3298191 bin=GWC2_Alphaproteobacteria_42_16 species=unknown genus=Azospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 family protein
04302015_16_scaffold_725_13
Monosiga brevicollis, Monosiga, Choanoflagellida, Eukaryota

Not on your lists

comp(9866..11494)
DNA (1629bp) protein (543aa)
Cytochrome c oxidase subunit 1 {ECO:0000256|RuleBase:RU000369}; EC=1.9.3.1 {ECO:0000256|RuleBase:RU000369};; TaxID=81824 species="Eukaryota; Choanoflagellida; Codonosigidae; Monosiga.;" source="Monosiga brevicollis (Choanoflagellate).;"
Cox1_2; Cox1_2; K02256 cytochrome c oxidase subunit 1 [EC:1.9.3.1] rbh
Cytochrome c oxidase subunit 1 n=1 Tax=Monosiga brevicollis RepID=Q8HIS9_MONBE rbh
04302015_16_scaffold_725_14
unknown

Not on your lists

11570..12196
DNA (627bp) protein (209aa)

This feature has no annotations

04302015_16_scaffold_725_15
unknown

Not on your lists

comp(12421..12825)
DNA (405bp) protein (135aa)

This feature has no annotations

04302015_16_scaffold_725_16
Monosiga brevicollis, Monosiga, Choanoflagellida, Eukaryota

Not on your lists

comp(13042..13764)
DNA (723bp) protein (241aa)
Cytochrome c oxidase subunit 2 n=1 Tax=Monosiga brevicollis RepID=Q8HIT0_MONBE rbh
Cytochrome c oxidase subunit 2 {ECO:0000256|RuleBase:RU000457}; TaxID=81824 species="Eukaryota; Choanoflagellida; Codonosigidae; Monosiga.;" source="Monosiga brevicollis (Choanoflagellate).;"
cox2; cytochrome c oxidase subunit 2; K02261 cytochrome c oxidase subunit 2
Displaying 16 items

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