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04302015_16_scaffold_578

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_578_1
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(270..1214)
DNA (945bp) protein (315aa)
Signal recognition particle receptor FtsY n=1 Tax=Caenispirillum salinarum AK4 RepID=K9HQ94_9PROT rbh
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
ftsY; cell division protein; K03110 fused signal recognition particle receptor rbh
04302015_16_scaffold_578_2
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1207..2550)
DNA (1344bp) protein (448aa)
Putative MiaB-like tRNA modifying enzyme n=2 Tax=Azospirillum brasilense RepID=G8AHV7_AZOBR rbh
2-methylthioadenine synthase {ECO:0000313|EMBL:AIB12773.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilense.;"
putative MiaB-like tRNA modifying enzyme rbh
04302015_16_scaffold_578_3
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2631..2954)
DNA (324bp) protein (108aa)
Thioredoxin n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IV84_RHOCS
trx; thioredoxin; K03671 thioredoxin 1
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
04302015_16_scaffold_578_4
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3573..4382)
DNA (810bp) protein (270aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
UDP pyrophosphate phosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=1 Tax=Oceanibaculum indicum P24 RepID=K2J1L5_9PROT
04302015_16_scaffold_578_5
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4387..4872)
DNA (486bp) protein (162aa)
alkyl hydroperoxide reductase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B52D1E
Bacterioferritin comigratory protein {ECO:0000313|EMBL:EKE78772.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
bcp; thiol peroxidase, thioredoxin-dependent
04302015_16_scaffold_578_6
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5142..8114
DNA (2973bp) protein (991aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TQA1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:AIL13105.1}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
hypothetical protein
04302015_16_scaffold_578_7
R_Alphaproteobacteria_41_14, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8129..9184
DNA (1056bp) protein (352aa)
glycoside hydrolase family 3 domain-containing protein; K01207 beta-N-acetylhexosaminidase [EC:3.2.1.52]
Glycoside hydrolase family 3 domain protein id=2438833 bin=GWA1_Alphaproteobacteria_45_9 species=Flexistipes sinusarabici genus=Flexistipes taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
Tax=RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated
04302015_16_scaffold_578_8
unknown

Not on your lists

9435..9683
DNA (249bp) protein (83aa)

This feature has no annotations

04302015_16_scaffold_578_9

Not on your lists

10021..11505
DNA (1485bp) protein (495aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CIY9_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD74314.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
RND efflux system outer membrane lipoprotein
04302015_16_scaffold_578_10
Geobacter uraniireducens, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11514..12632
DNA (1119bp) protein (373aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Geobacter uraniireducens (strain Rf4) RepID=A5GCF5_GEOUR
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABQ24741.1}; Flags: Precursor;; TaxID=351605 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter uraniireducens (strain Rf4) (Geobacter uraniumreducens).;"
04302015_16_scaffold_578_11
Rickettsia endosymbiont of Ixodes scapularis, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12768..14588
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Rickettsiaceae bacterium Os18 RepID=UPI00036E5C93
Putative uncharacterized protein {ECO:0000313|EMBL:EER22589.1}; TaxID=444612 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;" source="Rickettsia endosymbiont of Ixodes scapularis.;"
hypothetical protein
04302015_16_scaffold_578_12
GWF1_Spirochaetes_51_8_curated, Spirochaetes, Bacteria

Not on your lists

comp(14596..15042)
DNA (447bp) protein (149aa)
Putative uncharacterized protein id=2563943 bin=GWF1_Spirochaetes_51_8 species=Fulvivirga imtechensis genus=Fulvivirga taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF1_Spirochaetes_51_8 organism_group=Spirochaetes organism_desc=Novel clade
Tax=GWF1_Spirochaetes_51_8_curated
04302015_16_scaffold_578_13
GWF2_Alphaproteobacteria_58_20_curated, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15116..17002)
DNA (1887bp) protein (629aa)
30S ribosomal protein S1 n=1 Tax=uncultured bacterium RepID=K2DVD0_9BACT rbh
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1 rbh
Tax=GWF2_Alphaproteobacteria_58_20_curated
04302015_16_scaffold_578_14
Skermanella stibiiresistens, Skermanella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17111..17758)
DNA (648bp) protein (216aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1385369 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Skermanella.;" source="Skermanella stibiiresistens SB22.;"
Cytidylate kinase id=3710600 bin=GWC2_Alphaproteobacteria_42_16 species=Fulvimarina pelagi genus=Fulvimarina taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
cmk; cytidylate kinase
04302015_16_scaffold_578_15
R_Alphaproteobacteria_41_14, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17755..18492)
DNA (738bp) protein (246aa)
tRNA (guanine-N(7)-)-methyltransferase; K03439 tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]
tRNA (Guanine-N(7)-)-methyltransferase id=3409906 bin=GWA1_Alphaproteobacteria_45_9 species=Thalassospira xiamenensis genus=Thalassospira taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small
Tax=RIFCSPHIGHO2_01_FULL_Alphaproteobacteria_41_14_curated
04302015_16_scaffold_578_16

Not on your lists

comp(18489..20114)
DNA (1626bp) protein (542aa)
Apolipoprotein N-acyltransferase id=3827314 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum centenum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Uncharacterized protein {ECO:0000313|EMBL:EKE10284.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
cutE; apolipoprotein N-acyltransferase rbh
04302015_16_scaffold_578_17
Thalassospira sp. HJ, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20111..20914)
DNA (804bp) protein (268aa)
hemolysin C n=1 Tax=Thalassospira lucentensis RepID=UPI0003B54519
Hemolysin C {ECO:0000313|EMBL:KJE33650.1}; TaxID=1616823 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira sp. HJ.;"
putative divalent cation transporter (hemolysin and CBS domains)
04302015_16_scaffold_578_18
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21067..21618)
DNA (552bp) protein (184aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
Endoribonuclease YbeY n=1 Tax=Magnetospirillum sp. SO-1 RepID=M2ZPL4_9PROT
metal-dependent hydrolase; K07042 probable rRNA maturation factor
04302015_16_scaffold_578_19
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21633..22985)
DNA (1353bp) protein (451aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000255|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000255|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000255|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000255|HAMAP-Rule:MF_01864}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=MIAB_RHOCS rbh
miaB; (dimethylallyl)adenosine tRNA methylthiotransferase; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA rbh
04302015_16_scaffold_578_20
Inquilinus limosus, Inquilinus, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23020..23814)
DNA (795bp) protein (265aa)
Uncharacterized protein n=1 Tax=alpha proteobacterium IMCC14465 RepID=J9DVK7_9PROT
Acyl-phosphate glycerol 3-phosphate acyltransferase {ECO:0000313|EMBL:KGM32397.1}; TaxID=1398085 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Inquilinus.;" source="Inquilinus limosus MP06.;"
plsC; 1-acyl-sn-glycerol-3-phosphate acyltransferase
04302015_16_scaffold_578_21
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23804..24616)
DNA (813bp) protein (271aa)
Phosphohistidine phosphatase SixA family protein n=1 Tax=Acetobacteraceae bacterium AT-5844 RepID=H0A7C7_9PROT
hypothetical protein
Phosphohistidine phosphatase SixA family protein {ECO:0000313|EMBL:EHL96533.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
04302015_16_scaffold_578_22
Magnetospirillum magnetotacticum, Magnetospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24880..25305)
DNA (426bp) protein (142aa)
Transcriptional regulatory protein Ros n=1 Tax=Magnetospirillum sp. SO-1 RepID=M3A8Y2_9PROT
Transcriptional regulator {ECO:0000313|EMBL:KIL97954.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;"
transcriptional regulatory protein Ros
04302015_16_scaffold_578_23
Elstera litoralis, Elstera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25582..25929
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Azospirillum brasilense Sp245 RepID=G8AI16_AZOBR
Uncharacterized protein {ECO:0000313|EMBL:KJV09113.1}; TaxID=552518 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Elstera.;" source="Elstera litoralis.;"
hypothetical protein
04302015_16_scaffold_578_24
CG_Verruco_01, Verrucomicrobia, Bacteria

Not on your lists

comp(25945..26523)
DNA (579bp) protein (193aa)
ssuE; NADPH-dependent FMN reductase family protein; K00299 FMN reductase [EC:1.5.1.38]
NADPH-dependent FMN reductase family protein n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XKH2_SYNP2
Tax=CG_Verruco_01
04302015_16_scaffold_578_25
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26624..26824)
DNA (201bp) protein (67aa)
30S ribosomal protein S21 n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=RS21_RHOCS
rpsU; 30S ribosomal protein S21; K02970 small subunit ribosomal protein S21
30S ribosomal protein S21 {ECO:0000255|HAMAP-Rule:MF_00358}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
04302015_16_scaffold_578_26
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27089..27379)
DNA (291bp) protein (97aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Caedibacter.;" source="Candidatus Caedibacter acanthamoebae.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase; K01520 dUTP pyrophosphatase [EC:3.6.1.23]
deoxyuridine 5''''-triphosphate nucleotidohydrolase n=1 Tax=zeta proteobacterium SCGC AB-137-I08 RepID=UPI0003777D51
04302015_16_scaffold_578_27
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27426..27809)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IJC1_BEII9
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACB96239.1}; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia.;" source="Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB; 8712).;"
04302015_16_scaffold_578_28
Dickeya zeae, Dickeya, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27806..28033)
DNA (228bp) protein (76aa)
YcfA family protein n=1 Tax=Dickeya dadantii (strain Ech703) RepID=C6CDL0_DICDC
hypothetical protein; K07339 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJC66886.1}; TaxID=1427366 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Dickeya.;" source="Dickeya zeae EC1.;"
Displaying 28 items

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