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04302015_16_scaffold_83

Search features with annotation key words

Displaying items 1-30 of 375 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_83_1
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(1..8820)
DNA (8820bp) protein (2940aa)
Hemolysin-type calcium-binding region n=1 Tax=Glaciecola sp. HTCC2999 RepID=UPI0000E11B6C
hemolysin-type calcium-binding protein
Hemolysin-type calcium-binding region {ECO:0000313|EMBL:ADV63813.1}; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B).;"
04302015_16_scaffold_83_2
unknown

Not on your lists

comp(8836..9534)
DNA (699bp) protein (233aa)

This feature has no annotations

04302015_16_scaffold_83_3
Ramlibacter tataouinensis, Ramlibacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9680..11047)
DNA (1368bp) protein (456aa)
CyaD protein-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y536_RAMTT rbh
CyaD protein; K02022 HlyD family secretion protein rbh
CyaD protein-like protein {ECO:0000313|EMBL:AEG93876.1}; TaxID=365046 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Ramlibacter.;" source="Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543; / TTB310).;"
04302015_16_scaffold_83_4
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11044..13224)
DNA (2181bp) protein (727aa)
ABC transporter related n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21UW8_RHOFD rbh
ABC transporter-like protein; K06147 ATP-binding cassette, subfamily B, bacterial rbh
ABC transporter related {ECO:0000313|EMBL:ABD70435.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_16_scaffold_83_5
BJP_08E140C01_Burkholderiales_65_30, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13763..14386
DNA (624bp) protein (208aa)
Putative uncharacterized protein n=1 Tax=Haemophilus haemolyticus M21621 RepID=F9H251_HAEHA
hypothetical protein
Tax=BJP_08E140C01_Burkholderiales_65_30
04302015_16_scaffold_83_6
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14500..15099)
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHD2_THIDA
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
04302015_16_scaffold_83_7
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15361..15786)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QPN7_RALPI
Uncharacterized protein {ECO:0000313|EMBL:AGW92083.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia pickettii DTP0602.;"
hypothetical protein
04302015_16_scaffold_83_8
unknown

Not on your lists

comp(15761..16021)
DNA (261bp) protein (87aa)

This feature has no annotations

04302015_16_scaffold_83_9
R_Burkholderiales_69_20, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16018..16311)
DNA (294bp) protein (98aa)
Putative uncharacterized protein n=1 Tax=Nitrosomonas sp. AL212 RepID=F9ZG22_9PROT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_69_20_curated
04302015_16_scaffold_83_10
unknown

Not on your lists

comp(16323..16538)
DNA (216bp) protein (72aa)

This feature has no annotations

04302015_16_scaffold_83_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16630..17049)
DNA (420bp) protein (140aa)
Uncharacterized protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TSI0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:GAO22189.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
04302015_16_scaffold_83_12
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17262..18476)
DNA (1215bp) protein (405aa)
Phage integrase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21YR5_RHOFD rbh
phage integrase rbh
Phage integrase {ECO:0000313|EMBL:ABD69088.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_16_scaffold_83_13
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18788..20128)
DNA (1341bp) protein (447aa)
seryl-tRNA synthetase; K01875 seryl-tRNA synthetase [EC:6.1.1.11] rbh
Serine--tRNA ligase n=1 Tax=Polaromonas sp. CF318 RepID=J2KFW9_9BURK rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_16_scaffold_83_14
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20177..21127)
DNA (951bp) protein (317aa)
threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] rbh
L-threonine ammonia-lyase {ECO:0000313|EMBL:ABE42908.1}; EC=4.3.1.19 {ECO:0000313|EMBL:ABE42908.1};; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
L-threonine ammonia-lyase n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EY4_POLSJ rbh
04302015_16_scaffold_83_15
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21135..22127)
DNA (993bp) protein (331aa)
4-hydroxy-3-methylbut-2-enyl diphosphate reductase {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570}; EC=1.17.1.2 {ECO:0000256|HAMAP-Rule:MF_00191, ECO:0000256|SAAS:SAAS00096570};; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] rbh
4-hydroxy-3-methylbut-2-enyl diphosphate reductase n=1 Tax=Polaromonas sp. CF318 RepID=J2TKK9_9BURK rbh
04302015_16_scaffold_83_16
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22124..22612)
DNA (489bp) protein (163aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
FKBP-type peptidylprolyl isomerase; K03774 FKBP-type peptidyl-prolyl cis-trans isomerase SlpA [EC:5.2.1.8]
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Polaromonas sp. CF318 RepID=J2L1G6_9BURK
04302015_16_scaffold_83_17
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22770..23444
DNA (675bp) protein (225aa)
UPF0758 protein Bpro_0948 n=2 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Y948_POLSJ rbh
radC; DNA repair protein RadC; K03630 DNA repair protein RadC rbh
UPF0758 protein Bpro_0948; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_83_18
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23444..24106
DNA (663bp) protein (221aa)
Smr protein/MutS2 n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EY9_POLSJ rbh
Smr protein/MutS2 rbh
Smr protein/MutS2 {ECO:0000313|EMBL:ABE42903.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_83_19
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24290..24706)
DNA (417bp) protein (139aa)
Globin n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EZ1_POLSJ
globin; K06886 hemoglobin
Globin {ECO:0000313|EMBL:ABE42901.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_83_20
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24843..27455)
DNA (2613bp) protein (871aa)
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component n=1 Tax=Polaromonas sp. CF318 RepID=J2TKL3_9BURK rbh
Putative ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component {ECO:0000313|EMBL:EJL79082.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein; K02004 putative ABC transport system permease protein rbh
04302015_16_scaffold_83_21
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27504..28478)
DNA (975bp) protein (325aa)
Formate dehydrogenase, subunit FdhD n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EZ4_POLSJ rbh
formate dehydrogenase subunit FdhD; K02379 FdhD protein rbh
Formate dehydrogenase, subunit FdhD {ECO:0000313|EMBL:ABE42898.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_83_22
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28547..28936)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EZ5_POLSJ
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_16_scaffold_83_23
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28962..30134)
DNA (1173bp) protein (391aa)
Formate dehydrogenase gamma subunit {ECO:0000313|EMBL:ABM36154.1}; EC=1.2.1.2 {ECO:0000313|EMBL:ABM36154.1};; Flags: Precursor;; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
Formate dehydrogenase gamma subunit n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKH6_POLNA rbh
formate dehydrogenase subunit gamma; K00127 formate dehydrogenase, gamma subunit rbh
04302015_16_scaffold_83_24
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30147..30368)
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XWL5_RAMTT
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_16_scaffold_83_25
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30365..30988)
DNA (624bp) protein (208aa)
Fe-S-cluster-containing hydrogenase subunit n=1 Tax=Polaromonas sp. CF318 RepID=J2L1H5_9BURK rbh
4Fe-4S ferredoxin; K00124 formate dehydrogenase, beta subunit rbh
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
04302015_16_scaffold_83_26
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30998..33973)
DNA (2976bp) protein (992aa)
twin-arginine translocation pathway signal protein; K00123 formate dehydrogenase, alpha subunit [EC:1.2.1.2] rbh
Twin-arginine translocation pathway signal n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12EZ9_POLSJ rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_16_scaffold_83_27
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34006..34212)
DNA (207bp) protein (69aa)
Twin-arginine translocation pathway signal n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12F00_POLSJ
twin-arginine translocation pathway signal protein
Twin-arginine translocation pathway signal {ECO:0000313|EMBL:ABE42892.1}; Flags: Precursor;; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_83_28
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34442..35062)
DNA (621bp) protein (207aa)
Cytoplasmic chaperone TorD n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q12F01_POLSJ rbh
cytoplasmic chaperone TorD rbh
Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
04302015_16_scaffold_83_29
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(35072..37129)
DNA (2058bp) protein (686aa)
4Fe-4S ferredoxin, iron-sulfur binding domain protein n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VKH1_POLNA rbh
4Fe-4S ferredoxin rbh
4Fe-4S ferredoxin, iron-sulfur binding domain protein {ECO:0000313|EMBL:ABM36149.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_83_30
Polaromonas sp. CF318, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(37092..37793)
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. CF318 RepID=J2L1H9_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EJL79093.1}; Flags: Precursor;; TaxID=1144318 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CF318.;"
hypothetical protein
Displaying items 1-30 of 375 in total

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