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04302015_16_scaffold_393

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_393_1
CG_Rhodof_04, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

97..363
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BXY8_9BURK
hypothetical protein
Tax=CG_Rhodof_04
04302015_16_scaffold_393_2
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

369..920
DNA (552bp) protein (184aa)
Uncharacterized protein {ECO:0000313|EMBL:EWS66635.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. T4.;"
04302015_16_scaffold_393_3
Serratia marcescens, Serratia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

917..1966
DNA (1050bp) protein (350aa)
Protein containing DUF1016 n=2 Tax=mine drainage metagenome RepID=T1A9A7_9ZZZZ rbh
Uncharacterized protein {ECO:0000313|EMBL:AIU96754.1}; TaxID=615 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Serratia.;" source="Serratia marcescens.;"
hypothetical protein rbh
04302015_16_scaffold_393_4

Not on your lists

1963..3330
DNA (1368bp) protein (456aa)
putative restriction endonuclease S subunit; K01154 type I restriction enzyme, S subunit [EC:3.1.21.3] rbh
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DKB5_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD97721.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
04302015_16_scaffold_393_5

Not on your lists

3327..6563
DNA (3237bp) protein (1079aa)
Type III restriction protein res subunit n=2 Tax=mine drainage metagenome RepID=T0ZYV5_9ZZZZ rbh
Type III restriction protein res subunit {ECO:0000313|EMBL:EQD53406.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
hsdR-1; type I restriction enzyme subunit R rbh
04302015_16_scaffold_393_6

Not on your lists

6574..7878
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DVA0_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:EKD97728.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transposase rbh
04302015_16_scaffold_393_7
Bordetella sp. 8-296-03, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8078..9937
DNA (1860bp) protein (620aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003716904 rbh
AAA domain protein {ECO:0000313|EMBL:KCB37700.1}; TaxID=1331258 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella hinzii 8-296-03.;"
ATP-dependent OLD family endonuclease; K07459 putative ATP-dependent endonuclease of the OLD family rbh
04302015_16_scaffold_393_8
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9934..11463
DNA (1530bp) protein (510aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003743452 rbh
Exodeoxyribonuclease V%2C beta subunit {ECO:0000313|EMBL:CKI20307.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
superfamily I DNA/RNA helicase-like protein rbh
04302015_16_scaffold_393_9
Burkholderia cenocepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11863..12231
DNA (369bp) protein (123aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036AB22F
putative transposase
Putative transposase {ECO:0000313|EMBL:CAR53562.1}; TaxID=216591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656; / NCTC 13227 / J2315 / CF5610) (Burkholderia cepacia (strain J2315)).;"
04302015_16_scaffold_393_10
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12228..12569
DNA (342bp) protein (114aa)
IS66 Orf2 family protein n=2 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VWU0_POLNA
Mobile element protein {ECO:0000313|EMBL:CDS51877.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
IS66 Orf2 family protein
04302015_16_scaffold_393_11
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12649..14244
DNA (1596bp) protein (532aa)
Transposase IS66 n=2 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VVP8_POLNA rbh
Mobile element protein {ECO:0000313|EMBL:CDS55091.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. CG9_12.;"
transposase IS66 rbh
04302015_16_scaffold_393_12
Burkholderia fungorum, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14822..15139)
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=A9BSZ1_DELAS
Uncharacterized protein {ECO:0000313|EMBL:AJZ61029.1}; TaxID=134537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia fungorum.;"
hypothetical protein
04302015_16_scaffold_393_13
Delftia tsuruhatensis, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15329..16075
DNA (747bp) protein (249aa)
hypothetical protein n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B4243E
Uncharacterized protein {ECO:0000313|EMBL:KEH13783.1}; TaxID=180282 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia tsuruhatensis.;"
04302015_16_scaffold_393_14
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16072..16665
DNA (594bp) protein (198aa)
twitching motility protein PilT, partial n=1 Tax=Xanthomonas sp. M97 RepID=UPI0003B434EB
Uncharacterized protein {ECO:0000313|EMBL:KJV33297.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojuensis.;"
PilT protein domain-containing protein
04302015_16_scaffold_393_15
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17032..17613
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121G6_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46826.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_393_16
unknown

Not on your lists

17829..18515
DNA (687bp) protein (229aa)

This feature has no annotations

04302015_16_scaffold_393_17
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18699..19625
DNA (927bp) protein (309aa)
DNA/RNA non-specific endonuclease n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21Z56_RHOFD rbh
DNA/RNA non-specific endonuclease; K01173 endonuclease G, mitochondrial rbh
DNA/RNA non-specific endonuclease {ECO:0000313|EMBL:ABD68947.1}; Flags: Precursor;; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_16_scaffold_393_18
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19661..21793
DNA (2133bp) protein (711aa)
dinG; ATP-dependent DNA helicase DinG; K03722 ATP-dependent DNA helicase DinG [EC:3.6.4.12]
Putative uncharacterized protein n=1 Tax=Curvibacter putative symbiont of Hydra magnipapillata RepID=C9YFT6_9BURK
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
04302015_16_scaffold_393_19
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21952..23403
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121C9_POLSJ rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABE46863.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_393_20
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23413..23958
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121C8_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46864.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_393_21
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23988..24395
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121C7_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46865.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_393_22
unknown

Not on your lists

24434..24631
DNA (198bp) protein (66aa)

This feature has no annotations

04302015_16_scaffold_393_23
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24896..25195
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121B9_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46873.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_393_24
unknown

Not on your lists

25372..25722
DNA (351bp) protein (117aa)

This feature has no annotations

04302015_16_scaffold_393_25
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25838..26617
DNA (780bp) protein (260aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121A8_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46884.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_393_26
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26860..28848
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21QF2_RHOFD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ABD71993.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_16_scaffold_393_27
Polaromonas sp. JS666, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29027..29374)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Polaromonas sp. (strain JS666 / ATCC BAA-500) RepID=Q121B0_POLSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABE46882.1}; TaxID=296591 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp. (strain JS666 / ATCC BAA-500).;"
04302015_16_scaffold_393_28
unknown

Not on your lists

29608..29904
DNA (297bp) protein (99aa)

This feature has no annotations

04302015_16_scaffold_393_29
unknown

Not on your lists

comp(30010..30153)
DNA (144bp) protein (48aa)

This feature has no annotations

Displaying 29 items

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