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04302015_16_scaffold_576

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Displaying items 1-30 of 32 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_16_scaffold_576_1
CG_Rhodocyc_01, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

177..614
DNA (438bp) protein (146aa)
Transcriptional regulator, XRE family-like protein n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5XZ23_RAMTT
XRE family transcriptional regulator
Tax=CG_Rhodocyc_01
04302015_16_scaffold_576_2
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1151..1396)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 274B RepID=S2WYU1_DELAC
Uncharacterized protein {ECO:0000313|EMBL:EPD37947.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG 274B.;"
04302015_16_scaffold_576_3
unknown

Not on your lists

1566..1862
DNA (297bp) protein (99aa)

This feature has no annotations

04302015_16_scaffold_576_4
unknown

Not on your lists

1871..2389
DNA (519bp) protein (173aa)

This feature has no annotations

04302015_16_scaffold_576_5
unknown

Not on your lists

comp(2374..2799)
DNA (426bp) protein (142aa)

This feature has no annotations

04302015_16_scaffold_576_6
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2837..3280
DNA (444bp) protein (148aa)
Phage integrase n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21W70_RHOFD
phage integrase
Phage integrase {ECO:0000313|EMBL:ABD69983.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_16_scaffold_576_7
unknown

Not on your lists

comp(3449..3682)
DNA (234bp) protein (78aa)

This feature has no annotations

04302015_16_scaffold_576_8
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4300..6255
DNA (1956bp) protein (652aa)
Putative uncharacterized protein id=1269065 bin=GWE1_Burkholderiales_65_30 species=Azotobacter vinelandii genus=Azotobacter taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWE1_Burkholderiales_65_30 organism_group=Betaproteobacteria rbh
hypothetical protein rbh
Tax=GWE1_Burkholderiales_65_30_curated
04302015_16_scaffold_576_9
GWE1_Burkholderiales_65_30_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6252..7886
DNA (1635bp) protein (545aa)
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] id=5081827 bin=GWF1_Burkholderiales_GWF1_66_17 species=unknown genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] rbh
Tax=GWE1_Burkholderiales_65_30_curated
04302015_16_scaffold_576_10
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7883..8662
DNA (780bp) protein (260aa)
Enoyl-[acyl-carrier-protein] reductase [NADH] {ECO:0000256|PIRNR:PIRNR000094}; EC=1.3.1.9 {ECO:0000256|PIRNR:PIRNR000094};; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
enoyl-ACP reductase n=1 Tax=Methyloversatilis universalis RepID=UPI0003712951
enoyl-[acyl-carrier-protein] reductase [NADH] 1-like
04302015_16_scaffold_576_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8690..10474
DNA (1785bp) protein (595aa)
poly-beta-hydroxybutyrate polymerase-like protein; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-] id=12552376 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
poly-beta-hydroxybutyrate polymerase-like protein; K03821 polyhydroxyalkanoate synthase [EC:2.3.1.-]
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
04302015_16_scaffold_576_12
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10602..12011
DNA (1410bp) protein (470aa)
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase (EC:2.3.1.19); K00625 phosphate acetyltransferase [EC:2.3.1.8]
bifunctional enoyl-CoA hydratase/phosphate acetyltransferase n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036B7B5F
Putative phosphate acetyltransferase {ECO:0000313|EMBL:EGK70543.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
04302015_16_scaffold_576_13
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12043..13233
DNA (1191bp) protein (397aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis universalis (strain ATCC BAA-1314 / JCM 13912 /; FAM5).;"
Acetate kinase n=1 Tax=Methyloversatilis universalis FAM5 RepID=F5RG54_9RHOO rbh
uncharacterized LOC100490858 rbh
04302015_16_scaffold_576_14
Rhodoferax ferrireducens, Rhodoferax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13287..13691)
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WV9_RHOFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD69744.1}; TaxID=338969 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Rhodoferax.;" source="Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118); (Albidiferax ferrireducens).;"
04302015_16_scaffold_576_15
Polaromonas naphthalenivorans, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13799..15298)
DNA (1500bp) protein (500aa)
Adenylate cyclase n=1 Tax=Polaromonas naphthalenivorans (strain CJ2) RepID=A1VID6_POLNA rbh
adenylate cyclase rbh
Adenylate cyclase {ECO:0000313|EMBL:ABM35414.1}; TaxID=365044 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas naphthalenivorans (strain CJ2).;"
04302015_16_scaffold_576_16
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15607..16653
DNA (1047bp) protein (349aa)
Transcriptional regulator n=1 Tax=Acidovorax sp. CF316 RepID=J0KQ53_9BURK rbh
Transcriptional regulator {ECO:0000313|EMBL:EJE53308.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
LacI family transcriptional regulator rbh
04302015_16_scaffold_576_17
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16723..17736
DNA (1014bp) protein (338aa)
ABC transporter substrate-binding protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037A2D4B rbh
putative periplasmic solute-binding protein; K02055 putative spermidine/putrescine transport system substrate-binding protein rbh
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
04302015_16_scaffold_576_18
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17762..18586
DNA (825bp) protein (275aa)
ABC-type sulfate transport system, permease component n=1 Tax=Acidovorax sp. CF316 RepID=J1EM22_9BURK rbh
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein rbh
Tax=GWA2_Burkholderiales_64_37_curated
04302015_16_scaffold_576_19
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18591..19388
DNA (798bp) protein (266aa)
ABC-type spermidine/putrescine transport system, permease component II n=1 Tax=Acidovorax sp. CF316 RepID=J0KI31_9BURK rbh
ABC-type spermidine/putrescine transport system, permease component II {ECO:0000313|EMBL:EJE53305.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
binding-protein-dependent transport system inner membrane protein; K02053 putative spermidine/putrescine transport system permease protein rbh
04302015_16_scaffold_576_20
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19378..20448
DNA (1071bp) protein (357aa)
ABC-type spermidine/putrescine transport system, ATPase component n=1 Tax=Acidovorax sp. CF316 RepID=J1EM97_9BURK rbh
ABC-type spermidine/putrescine transport system, ATPase component {ECO:0000313|EMBL:EJE53304.1}; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
ABC transporter-like protein rbh
04302015_16_scaffold_576_21
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20445..21269
DNA (825bp) protein (275aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA {ECO:0000256|HAMAP-Rule:MF_00905}; Short=3',5'-cyclic AMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; Short=cAMP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_00905};; EC=3.1.4.17 {ECO:0000256|HAMAP-Rule:MF_00905};; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Acidovorax sp. CF316 RepID=J0KQ47_9BURK rbh
metallophosphoesterase rbh
04302015_16_scaffold_576_22
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21569..21982)
DNA (414bp) protein (138aa)
haloacid dehalogenase n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034A9897
HAD-superfamily subfamily IB hydrolase, TIGR01490 {ECO:0000313|EMBL:EJE50075.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. CF316.;"
HAD family hydrolase
04302015_16_scaffold_576_23
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22084..22899)
DNA (816bp) protein (272aa)
3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA n=1 Tax=Oceanibaculum indicum P24 RepID=K2K7T6_9PROT
putative cAMP phosphodiesterase
Tax=BJP_IG2103_Rhodocyclales_63_50
04302015_16_scaffold_576_24
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23057..24385
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00036F8018
glycerol-3-phosphate ABC transporter substrate-binding protein; K05813 sn-glycerol 3-phosphate transport system substrate-binding protein
Tax=BJP_IG2103_Rhodocyclales_63_50
04302015_16_scaffold_576_25
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24401..25336
DNA (936bp) protein (312aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI00036696D4
ABC transporter permease; K05814 sn-glycerol 3-phosphate transport system permease protein
Tax=BJP_IG2103_Rhodocyclales_63_50
04302015_16_scaffold_576_26
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25339..26172
DNA (834bp) protein (278aa)
hypothetical protein n=1 Tax=Spirochaeta alkalica RepID=UPI000376FE3C
binding-protein-dependent transport system inner membrane protein; K05815 sn-glycerol 3-phosphate transport system permease protein
Tax=BJP_IG2103_Rhodocyclales_63_50
04302015_16_scaffold_576_27
BJP_08E140C01_Roseovarius_63_250, Roseovarius, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26205..27275
DNA (1071bp) protein (357aa)
ABC transporter related n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L4G5_FRASN rbh
ABC transporter-like protein rbh
Tax=BJP_08E140C01_Roseovarius_63_250
04302015_16_scaffold_576_28
BJP_IG2103_Rhodocyclales_63_50, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27280..28059
DNA (780bp) protein (260aa)
Transcriptional regulator, DeoR family n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TCC6_BURPP
DeoR family transcriptional regulator; K02444 DeoR family transcriptional regulator, glycerol-3-phosphate regulon repressor
Tax=BJP_IG2103_Rhodocyclales_63_50
04302015_16_scaffold_576_29
Pseudomonas sp. 2(2015), Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28272..29561)
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Pseudomonas sp. HYS RepID=UPI00029A060D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJK18833.1}; TaxID=1619950 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. 2(2015).;"
hypothetical protein
04302015_16_scaffold_576_30
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29578..31314)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida CSV86 RepID=L1M4F0_PSEPU rbh
Uncharacterized protein {ECO:0000313|EMBL:EKX85816.1}; TaxID=1005395 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida CSV86.;"
hypothetical protein rbh
Displaying items 1-30 of 32 in total

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