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04302015_17_454

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_17_454_1
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140..418
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEX5_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS44545.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_17_454_2
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

671..1489
DNA (819bp) protein (273aa)
Uncharacterized protein involved in ubiquinone biosynthesis-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEX6_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS44546.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_17_454_3
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1782..2861
DNA (1080bp) protein (360aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF14_NOVAD rbh
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:KHS46002.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
Rieske (2Fe-2S) domain-containing protein
04302015_17_454_4
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3026..3481
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF62_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS46072.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_17_454_5
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3517..4296
DNA (780bp) protein (260aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF15_NOVAD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP64526.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
04302015_17_454_6
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4468..5046
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF63_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS46073.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_17_454_7
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5043..5819
DNA (777bp) protein (259aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF66_NOVAD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KHS46074.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
short-chain dehydrogenase/reductase SDR
04302015_17_454_8
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5836..6171
DNA (336bp) protein (112aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF67_NOVAD
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:KHS46075.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
short-chain dehydrogenase/reductase SDR
04302015_17_454_9
Sphingobium lactosutens, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6274..7782
DNA (1509bp) protein (503aa)
Transposase n=5 Tax=Sphingobium RepID=I5BCR1_9SPHN rbh
Transposase IS21 {ECO:0000313|EMBL:EQB16073.1}; TaxID=1331060 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium lactosuten
transposase
04302015_17_454_10
Sphingopyxis sp. LC363, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7779..8546
DNA (768bp) protein (256aa)
IstB domain protein ATP-binding protein n=4 Tax=Sphingomonadaceae RepID=A5VG33_SPHWW rbh
IstB ATP binding domain-containing protein
ATPase AAA {ECO:0000313|EMBL:KGB54718.1}; TaxID=1120705 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingopyxis.;" source="Sphingopyxis sp. LC363.;"
04302015_17_454_11
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8642..8971
DNA (330bp) protein (110aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XF67_NOVAD
short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ABP64578.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
04302015_17_454_12
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9135..10304
DNA (1170bp) protein (390aa)
Luciferase family protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEU3_NOVAD
luciferase family protein
Luciferase family protein {ECO:0000313|EMBL:ABP64454.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
04302015_17_454_13
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10311..11489
DNA (1179bp) protein (393aa)
Transcriptional regulator, LuxR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEU4_NOVAD rbh
LuxR family transcriptional regulator rbh
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ABP64455.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
04302015_17_454_14
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12738..14243)
DNA (1506bp) protein (502aa)
Amidase {ECO:0000313|EMBL:KHS44532.1}; EC=3.5.1.4 {ECO:0000313|EMBL:KHS44532.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobi
Amidase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEV1_NOVAD rbh
amidase rbh
04302015_17_454_15
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14243..15328)
DNA (1086bp) protein (362aa)
Rieske (2Fe-2S) domain protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEV0_NOVAD rbh
Rieske (2Fe-2S) domain-containing protein {ECO:0000313|EMBL:KHS44531.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
Rieske (2Fe-2S) domain-containing protein rbh
04302015_17_454_16
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15585..16454)
DNA (870bp) protein (290aa)
Amidohydrolase 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEU8_NOVAD rbh
Amidohydrolase 2 {ECO:0000313|EMBL:KHS44530.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subt
amidohydrolase 2 rbh
04302015_17_454_17
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16456..18132)
DNA (1677bp) protein (559aa)
AMP-dependent synthetase and ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEU7_NOVAD rbh
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:KHS44529.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
AMP-dependent synthetase and ligase rbh
04302015_17_454_trna_1
unknown

Not on your lists

comp(18479..18550)
DNA (72bp)
transferRNA
04302015_17_454_18
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18650..18973
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA25_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KHS42674.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
04302015_17_454_19
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19107..20003)
DNA (897bp) protein (299aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA24_NOVAD rbh
LysR family transcriptional regulator rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD25299.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
04302015_17_454_20
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20111..21610
DNA (1500bp) protein (500aa)
methylmalonate-semialdehyde dehydrogenase (EC:1.2.1.27)
Methylmalonate-semialdehyde dehydrogenase (Acylating) {ECO:0000313|EMBL:ABD25300.1}; EC=1.2.1.27 {ECO:0000313|EMBL:ABD25300.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA23_NOVAD rbh
04302015_17_454_21
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21686..22180
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA22_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KHS42671.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobi
hypothetical protein
04302015_17_454_22
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22195..22491
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA21_NOVAD
Peptidase inhibitor I78 family protein {ECO:0000313|EMBL:KHS42670.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
hypothetical protein
04302015_17_454_23
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22576..23718
DNA (1143bp) protein (381aa)
Butyryl-CoA dehydrogenase {ECO:0000313|EMBL:KHS42669.1}; EC=1.3.8.1 {ECO:0000313|EMBL:KHS42669.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
butyryl-CoA dehydrogenase (EC:1.3.99.2) rbh
Butyryl-CoA dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA20_NOVAD rbh
04302015_17_454_24
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23715..24776
DNA (1062bp) protein (354aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA19_NOVAD rbh
enoyl-CoA hydratase/isomerase
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:ABD25304.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
04302015_17_454_25
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24890..25675
DNA (786bp) protein (262aa)
short chain enoyl-CoA hydratase (EC:4.2.1.17)
Short chain enoyl-CoA hydratase {ECO:0000313|EMBL:ABD25305.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ABD25305.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
Short chain enoyl-CoA hydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA18_NOVAD
04302015_17_454_26
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25819..26712
DNA (894bp) protein (298aa)
3-hydroxyisobutyrate dehydrogenase (EC:1.1.1.31) rbh
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=279238 species="Bacteria; Proteob
3-hydroxyisobutyrate dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA17_NOVAD rbh
04302015_17_454_27
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26823..27602)
DNA (780bp) protein (260aa)
CHAP protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GA16_NOVAD rbh
Surface antigen {ECO:0000313|EMBL:KHS42664.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subte
hypothetical protein rbh
Displaying 28 items

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