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04302015_17_492

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_17_492_1
Pseudomonas sp. EGD-AK9, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

276..1127
DNA (852bp) protein (284aa)
Resolvase n=7 Tax=Bacteria RepID=Q46M17_CUPPJ rbh
resolvase rbh
Resolvase {ECO:0000313|EMBL:ERI50906.1}; TaxID=1386078 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. EGD-AK9.;"
04302015_17_492_2
Comamonas sp. 7D-2, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1129..1803)
DNA (675bp) protein (225aa)
Phage DNA methylase n=7 Tax=Bacteria RepID=Q6UP47_CUPPJ rbh
phage DNA methylase rbh
Uncharacterized protein {ECO:0000313|EMBL:AGJ70712.1}; TaxID=1232667 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. 7D-2.;"
04302015_17_492_3
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1958..2389)
DNA (432bp) protein (144aa)
Uncharacterized protein n=15 Tax=Bacteria RepID=A1WDN3_ACISJ
hypothetical protein
Upf30.5 protein {ECO:0000313|EMBL:AJM90418.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xyl
04302015_17_492_4
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2405..3103)
DNA (699bp) protein (233aa)
Conjugal transfer protein TrbP n=11 Tax=Bacteria RepID=E8U2U3_ALIDB rbh
conjugal transfer protein trbp rbh
TrbP {ECO:0000313|EMBL:AFJ38131.1}; TaxID=1168066 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subs
04302015_17_492_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3103..3369)
DNA (267bp) protein (89aa)
Uncharacterized protein n=14 Tax=Bacteria RepID=E8U2U2_ALIDB
hypothetical protein
TrbO protein {ECO:0000313|EMBL:BAP34649.1}; TaxID=80870 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae subsp. avenae.;"
04302015_17_492_6
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3398..4033)
DNA (636bp) protein (212aa)
Lytic transglycosylase catalytic n=17 Tax=Bacteria RepID=E8U2U1_ALIDB rbh
conjugal transfer protein TrbN rbh
Muramidase TrbN {ECO:0000313|EMBL:AAK38014.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomona
04302015_17_492_7
Bordetella bronchiseptica, Bordetella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4047..4634)
DNA (588bp) protein (196aa)
Conjugal transfer protein TrbM n=15 Tax=Bacteria RepID=E8U2U0_ALIDB rbh
conjugal transfer protein trbm
TrbM {ECO:0000313|EMBL:AJS10304.1}; TaxID=518 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" source="Bordetella bronchiseptica (Alcaligenes bronc
04302015_17_492_8
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4652..6370)
DNA (1719bp) protein (573aa)
P-type conjugative transfer protein TrbL n=14 Tax=Bacteria RepID=E8U2T9_ALIDB rbh
P-type conjugative transfer protein trbl rbh
TrbL {ECO:0000313|EMBL:AFJ38127.1}; TaxID=1168066 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subs
04302015_17_492_9
Variovorax sp. DB1, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6381..6608)
DNA (228bp) protein (76aa)
Entry exclusion protein TrbK n=16 Tax=Bacteria RepID=E8U2T8_ALIDB
entry exclusion protein trbk
TrbK entry exclusion protein {ECO:0000313|EMBL:AFK33070.1}; TaxID=1179817 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. D
04302015_17_492_10
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6618..7382)
DNA (765bp) protein (255aa)
P-type conjugative transfer protein TrbJ n=15 Tax=Bacteria RepID=E8U2T7_ALIDB rbh
conjugal transfer protein TrbJ
Mating pair formation protein TrbJ {ECO:0000313|EMBL:AAK38010.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testo
04302015_17_492_11
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7403..8824)
DNA (1422bp) protein (474aa)
Conjugation TrbI family protein n=16 Tax=Bacteria RepID=E8U2T6_ALIDB rbh
conjugal transfer protein TrbI rbh
TrbI {ECO:0000313|EMBL:ACU65247.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter sideroc
04302015_17_492_12
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8829..9317)
DNA (489bp) protein (163aa)
Conjugal transfer protein TrbH n=16 Tax=Bacteria RepID=E8U2T5_ALIDB rbh
conjugal transfer protein trbh
TrbH {ECO:0000313|EMBL:ACU65246.1}; TaxID=303 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida (Arthrobacter sideroc
04302015_17_492_13
Comamonas sp. 7D-2, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9320..10219)
DNA (900bp) protein (300aa)
Mating pair formation n=15 Tax=Bacteria RepID=Q6UP58_CUPPJ rbh
conjugal transfer protein TrbG
TrbG {ECO:0000313|EMBL:AGJ70723.1}; TaxID=1232667 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas sp. 7D-2.;"
04302015_17_492_14
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10237..11019)
DNA (783bp) protein (261aa)
Conjugal transfer protein TrbF n=7 Tax=Bacteria RepID=E8U2T3_ALIDB rbh
conjugal transfer protein trbf
TrbF {ECO:0000313|EMBL:BAC81989.1}; TaxID=80866 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans (Pseudomonas acidovorans)
04302015_17_492_15

Not on your lists

comp(11016..13574)
DNA (2559bp) protein (853aa)
TrbE protein n=1 Tax=uncultured bacterium RepID=Q4LCF5_9BACT rbh
TrbE protein {ECO:0000313|EMBL:CAI10751.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
type IV secretion/conjugal transfer atpase, virb4 family
04302015_17_492_16
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13571..13882)
DNA (312bp) protein (104aa)
Conjugal transfer TrbD family protein n=19 Tax=Bacteria RepID=A1WDP6_ACISJ
conjugal transfer protein TrbD
TrbD {ECO:0000313|EMBL:AFJ38119.1}; TaxID=1168066 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subs
04302015_17_492_17
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13886..14350)
DNA (465bp) protein (155aa)
Conjugal transfer protein TrbC n=16 Tax=Bacteria RepID=E8U2T0_ALIDB rbh
conjugal transfer protein trbc
Protein TrbC {ECO:0000313|EMBL:AFJ38118.1}; TaxID=1168066 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium absces
04302015_17_492_18
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14367..15329)
DNA (963bp) protein (321aa)
Type II secretion system protein E n=14 Tax=Bacteria RepID=Q0B0Z5_BURCM rbh
conjugal transfer ATPase TrbB rbh
TrbB {ECO:0000313|EMBL:AFJ38117.1}; TaxID=1168066 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="Mycobacterium abscessus subs
04302015_17_492_19
Delftia sp. KV29, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15639..16001)
DNA (363bp) protein (121aa)
Transcriptional regulator, XRE family n=6 Tax=root RepID=Q0B139_BURCM
conjugal transfer protein TrbA
TrbA repressor {ECO:0000313|EMBL:AFJ11813.1}; TaxID=1170710 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. KV29.;"
04302015_17_492_20
Variovorax sp. DB1, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16115..16456
DNA (342bp) protein (114aa)
Single-stranded DNA-binding protein n=16 Tax=Bacteria RepID=E8U2S7_ALIDB
single-strand binding protein
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1179817 species="Bacteria; Proteobacteria; Bet
04302015_17_492_21
Mycobacterium abscessus, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16503..17723
DNA (1221bp) protein (407aa)
TrfA family protein n=15 Tax=Bacteria RepID=E8U2S6_ALIDB rbh
trfa family protein
Replication initiation protein {ECO:0000313|EMBL:AFJ38175.1}; TaxID=1168066 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium abscessus.;" source="My
04302015_17_492_trna_1
unknown

Not on your lists

18438..18522
DNA (85bp)
transferRNA
04302015_17_492_22
unknown

Not on your lists

comp(18663..18818)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 23 items

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