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04302015_17_429

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_17_429_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..844
DNA (843bp) protein (281aa)
(Fe-S)-binding protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003707171
iron-sulfur cluster-binding protein Tax=GWE1_Thiobacillus_62_9_curated
(Fe-S)-binding protein
04302015_17_429_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

841..1617
DNA (777bp) protein (259aa)
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Putative uncharacterized protein id=1308437 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein
04302015_17_429_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1614..1799
DNA (186bp) protein (62aa)
Cytochrome oxidase maturation protein cbb3-type id=1308438 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cytochrome oxidase maturation protein cbb3-type Tax=GWE1_Thiobacillus_62_9_curated
cytochrome oxidase maturation protein cbb3-type
04302015_17_429_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1834..1941
DNA (108bp) protein (36aa)
id=12495687 bin=THIO_MID tax=THIO_MID organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
04302015_17_429_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2006..2851)
DNA (846bp) protein (282aa)
RNA polymerase sigma factor id=1308440 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
sigma-70 factor; K03089 RNA polymerase sigma-32 factor Tax=GWE1_Thiobacillus_62_9_curated
sigma-70 factor
04302015_17_429_6
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2946..3854)
DNA (909bp) protein (303aa)
Cell division protein FtsX id=1308441 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
cell division protein FtsX; K09811 cell division transport system permease protein Tax=GWE1_Thiobacillus_62_9_curated
cell division protein FtsX
04302015_17_429_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3851..4513)
DNA (663bp) protein (221aa)
ABC transporter n=1 Tax=Thiobacillus denitrificans RepID=UPI00037A51EA
cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=GWE1_Thiobacillus_62_9_curated
cell division ATP-binding protein FtsE
04302015_17_429_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4526..5548)
DNA (1023bp) protein (341aa)
cell division protein FtsY n=1 Tax=Thiobacillus thioparus RepID=UPI00036C836F
signal recognition particle-docking protein FtsY; K03110 fused signal recognition particle receptor Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
signal recognition particle-docking protein FtsY
04302015_17_429_9
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5667..7025
DNA (1359bp) protein (453aa)
insulinase family protein; K01422 [EC:3.4.99.-] Tax=GWE1_Thiobacillus_62_9_curated
Insulinase family protein id=1308444 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
insulinase
04302015_17_429_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7015..8355
DNA (1341bp) protein (447aa)
insulinase family protein; K01422 [EC:3.4.99.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
zinc protease n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BB06E
insulinase
04302015_17_429_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8345..8920
DNA (576bp) protein (192aa)
hypothetical protein; K00599 [EC:2.1.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Putative uncharacterized protein id=1308446 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
hypothetical protein rbh
04302015_17_429_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8923..9405
DNA (483bp) protein (161aa)
phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] id=12494791 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
phosphopantetheine adenylyltransferase (EC:2.7.7.3); K00954 pantetheine-phosphate adenylyltransferase [EC:2.7.7.3] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
phosphopantetheine adenylyltransferase (EC:2.7.7.3)
04302015_17_429_13
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9424..9672
DNA (249bp) protein (83aa)
ferredoxin n=1 Tax=Thiobacillus thioparus RepID=UPI0003740AB3
ferredoxin protein Tax=GWE1_Thiobacillus_62_9_curated
ferredoxin protein
04302015_17_429_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9673..11637)
DNA (1965bp) protein (655aa)
GTPase n=1 Tax=Thiobacillus thioparus RepID=UPI0003681179
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
04302015_17_429_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11716..12528)
DNA (813bp) protein (271aa)
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18); K10563 formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18] Tax=GWE1_Thiobacillus_62_9_c
DNA-(apurinic or apyrimidinic site) lyase / formamidopyrimidine-DNA glycosylase (EC:3.2.2.23 4.2.99.18)
Formamidopyrimidine-DNA glycosylase id=1308450 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
04302015_17_429_16
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12748..14493
DNA (1746bp) protein (582aa)
Putative uncharacterized protein id=1308451 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
TPR repeat-containing protein Tax=GWE1_Thiobacillus_62_9_curated
TPR repeat-containing protein
04302015_17_429_17
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14493..15056
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036AB3C9
outer membrane lipoprotein LolB; K02494 outer membrane lipoprotein LolB Tax=GWE1_Thiobacillus_62_9_curated
outer membrane lipoprotein LolB
04302015_17_429_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15053..15886
DNA (834bp) protein (278aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC:2.7.1.148)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000255|HAMAP-Rule:MF_00061}; Short=CMK {ECO:0000255|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000255|HAMAP-Rule:MF_00061};; 4-(cytidine-5'-dipho
4-diphosphocytidyl-2C-methyl-D-erythritol kinase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003788A70
04302015_17_429_trna_1
unknown

Not on your lists

15901..15972
DNA (72bp)
transferRNA
04302015_17_429_19
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16051..17001
DNA (951bp) protein (317aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=GWE1_Thiobacillus_62_9_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase id=1308454 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
04302015_17_429_20
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


17093..17737
DNA (645bp) protein (215aa)
50S ribosomal protein L25 n=1 Tax=Thiobacillus denitrificans RepID=UPI000374C878
50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000255|HAMAP-Rule:MF_01334}; General stress protein CTC {ECO:0000255|HAMAP-Rule:MF_01334}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogeno
04302015_17_429_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17780..18385
DNA (606bp) protein (202aa)
peptidyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase id=1308456 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
04302015_17_429_22
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18428..19519
DNA (1092bp) protein (364aa)
GTP-binding protein YchF n=1 Tax=Thiobacillus thioparus RepID=UPI0003647F22
ychF; GTP-dependent nucleic acid-binding protein EngD; K06942 Tax=GWE1_Thiobacillus_62_9_curated
ychF; GTP-dependent nucleic acid-binding protein EngD
04302015_17_429_trna_2
unknown

Not on your lists

19591..19672
DNA (82bp)
transferRNA
04302015_17_429_trna_3
unknown

Not on your lists

19747..19817
DNA (71bp)
transferRNA
04302015_17_429_trna_4
unknown

Not on your lists

19866..19937
DNA (72bp)
transferRNA
Displaying 26 items

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