ggKbase home page

04302015_17_273

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_17_273_1

Not on your lists

comp(153..1004)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Novispirillum itersonii RepID=UPI00036705D1
R3H domain protein {ECO:0000313|EMBL:AIA11173.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
uracil-DNA glycosylase
04302015_17_273_2
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1091..2914)
DNA (1824bp) protein (608aa)
glmS; L-glutamine:D-fructose-6-phosphate aminotransferase (EC:2.6.1.16)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000313|EMBL:CCQ72755
hypothetical protein n=1 Tax=Kiloniella laminariae RepID=UPI00036C23B1
04302015_17_273_3
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2915..4285)
DNA (1371bp) protein (457aa)
glmU; bifunctional: N-acetyl glucosamine-1-phosphate uridyltransferase (N-terminal); glucosamine-1-phosphate acetyl transferase (C-terminal) (EC:2.7.7.23 2.3.1.157)
Bifunctional protein GlmU n=1 Tax=Roseibium sp. TrichSKD4 RepID=E2CCT6_9RHOB
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rose
04302015_17_273_4

Not on your lists

4437..5993
DNA (1557bp) protein (519aa)
Virulence factor MVIN-like protein id=4799283 bin=GWC2_Alphaproteobacteria_42_16 species=Rhodospirillum rubrum genus=Rhodospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
Putative lipid II flippase MurJ {ECO:0000256|PIRNR:PIRNR002869}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
04302015_17_273_5
unknown

Not on your lists

6225..6887
DNA (663bp) protein (221aa)

This feature has no annotations

04302015_17_273_6
Rickettsia hoogstraalii, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7368..7763)
DNA (396bp) protein (132aa)
Putative nucleic-acid-binding protein n=2 Tax=Rickettsia bellii RepID=Q1RH54_RICBR
PIN domain protein {ECO:0000313|EMBL:KJV80960.1}; TaxID=1359197 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group.;"
nucleic-acid-binding protein
04302015_17_273_7
Rickettsia massiliae, Rickettsia, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7783..8034)
DNA (252bp) protein (84aa)
Transcriptional regulator, AbrB family n=1 Tax=Rickettsia massiliae (strain Mtu5) RepID=A8F1K8_RICM5
AbrB family transcriptional regulator
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:ABV84794.1}; TaxID=416276 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; Rickettsiaceae; Rickettsieae; Rickettsia; spot
04302015_17_273_8
Thalassospira permensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8154..9308)
DNA (1155bp) protein (385aa)
DNA replication and repair protein RecF n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L861_9PROT rbh
DNA replication and repair protein
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1353532 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodos
04302015_17_273_9
Candidatus Puniceispirillum marinum, Candidatus Puniceispirillum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9457..9744
DNA (288bp) protein (96aa)
integration host factor subunit beta (EC:2.3.1.129)
Integration host factor subunit beta n=1 Tax=Puniceispirillum marinum (strain IMCC1322) RepID=D5BT99_PUNMI
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; TaxID=488538 species="Bacteria; Proteobacteria; Alphaproteobacteria; SAR116 cluster; Candidatus Pun
04302015_17_273_10
RLO_Rhodospirillales_58_28, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10166..11158)
DNA (993bp) protein (331aa)
nucleoside-diphosphate-sugar epimerase; K08679 UDP-glucuronate 4-epimerase [EC:5.1.3.6] Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_58_28_curated
Nucleoside-diphosphate-sugar epimerase id=3529087 bin=GWA1_Alphaproteobacteria_45_9 species=unknown genus=Magnetospirillum taxon_order=Rhodospirillales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA1_Alphaproteobacteria_45_9 organism_group=Alphaproteobacteria organism_desc=Good marker genes; small rbh
hypothetical protein
04302015_17_273_11
Candidatus Caedibacter acanthamoebae, Caedibacter, Rickettsiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11289..14942)
DNA (3654bp) protein (1218aa)
ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleotide-diphosphate reductase subunit alpha {ECO:0000313|EMBL:AIL12921.1}; EC=1.17.4.1 {ECO:0000313|EMBL:AIL12921.1};; TaxID=244581 species="Bacteria; Proteobacteria; Alphaproteobacteria; Ricke
ribonucleotide-diphosphate reductase subunit alpha id=4794838 bin=GWC2_Alphaproteobacteria_42_16 species=Candidatus Odyssella thessalonicensis genus=Candidatus Odyssella taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good + rbh
04302015_17_273_12
Azospirillum brasilense, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15037..15627)
DNA (591bp) protein (197aa)
lysine decarboxylase
Lysine decarboxylase {ECO:0000313|EMBL:AIB11213.1}; TaxID=192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum brasilen
Putative uncharacterized protein id=2042839 bin=GWE2_Bacteroidetes_32_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=Good +
04302015_17_273_13
Phaeospirillum fulvum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15662..17443)
DNA (1782bp) protein (594aa)
Aspartyl-tRNA ligase {ECO:0000313|EMBL:EPY01473.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EPY01473.1};; TaxID=1316936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Aspartate--tRNA ligase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9SBK0_PHAFV rbh
aspartyl-tRNA synthetase
04302015_17_273_14
unknown

Not on your lists

comp(17764..19497)
DNA (1734bp) protein (578aa)

This feature has no annotations

04302015_17_273_15
R_Alphaproteobacteria_42_30, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


19779..20372
DNA (594bp) protein (198aa)
Putative uncharacterized protein id=2719390 bin=GWC2_Alphaproteobacteria_42_16 species=Holospora undulata genus=Holospora taxon_order=Rickettsiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Alphaproteobacteria_42_16 organism_group=Alphaproteobacteria organism_desc=Rhodospirillales related? Good +
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Alphaproteobacteria_42_30_curated
hypothetical protein
04302015_17_273_16
RIFOXYD12_FULL_Rhodospirillales_60_8_curated, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20461..21057
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Magnetospirillum gryphiswaldense RepID=A4TZJ1_9PROT
hypothetical protein Tax=RIFOXYD12_FULL_Rhodospirillales_60_8_curated
hypothetical protein
04302015_17_273_17
Candidatus Liberibacter americanus, Candidatus Liberibacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21086..22417)
DNA (1332bp) protein (444aa)
Glucokinase {ECO:0000313|EMBL:AHA28205.1}; TaxID=1261131 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Candidatus Liberibacter.;" source="Candidatus Liberibacter a
04302015_17_273_18
Burkholderiaceae bacterium 26, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22612..23214)
DNA (603bp) protein (201aa)
DJ-1/PfpI family protein n=1 Tax=Methylomonas sp. MK1 RepID=UPI000382D28E
AraC family transcriptional regulator {ECO:0000313|EMBL:KJJ95352.1}; TaxID=1619951 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;" source="Burkholderiaceae
ThiJ/PfpI family protein
04302015_17_273_19
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23262..24143)
DNA (882bp) protein (294aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Thioflavicoccus mobilis 8321 RepID=L0GT93_9GAMM
alpha/beta hydrolase
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:AGA89231.1}; Flags: Precursor;; TaxID=765912 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chr
04302015_17_273_trna_1
unknown

Not on your lists

comp(24265..24336)
DNA (72bp)
transferRNA
04302015_17_273_20
R_Gammaproteobacteria_42_13, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24417..25145)
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EGX3_9BACT
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_42_13_curated
hypothetical protein
04302015_17_273_21
Bartonella australis, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25534..25776
DNA (243bp) protein (81aa)
Transcriptional regulator, XRE family protein n=1 Tax=Bartonella australis (strain Aust/NH1) RepID=M1N4I5_BARAA
transcriptional regulator, XRE family protein
Transcriptional regulator, XRE family protein {ECO:0000313|EMBL:AGF74809.1}; TaxID=1094489 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Ba
04302015_17_273_22
Bartonella sp. TT0105, Bartonella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25788..27041
DNA (1254bp) protein (418aa)
HipA domain-containing protein n=1 Tax=Bartonella vinsonii subsp. berkhoffii (strain Winnie) RepID=M1P7B8_BARVW rbh
HipA domain-containing protein rbh
Protein kinase HipA {ECO:0000313|EMBL:ADN97097.1}; TaxID=596995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bartonellaceae; Bartonella.;" source="Bartonella sp. TT0105.;"
04302015_17_273_23
GWD2_Desulfuromonadales_61_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27094..27264)
DNA (171bp) protein (57aa)
Phd-YefM n=1 Tax=Pseudomonas sp. GM25 RepID=J2PCE4_9PSED
Phd-YefM
prevent-host-death family protein Tax=GWD2_Desulfuromonadales_61_12_curated
Displaying 24 items

View Taxonomy