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04302015_20_scaffold_541

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_541_1
Methylobacterium sp. ME121, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

68..1378
DNA (1311bp) protein (437aa)
hypothetical protein n=1 Tax=Rhizobium sp. JGI 0001005-H05 RepID=UPI000374FCDD rbh
Transposase {ECO:0000313|EMBL:GAN52658.1}; TaxID=1604132 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. ME121.;"
transposase IS4 family protein rbh
04302015_20_scaffold_541_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1702..3594
DNA (1893bp) protein (631aa)
hydrogenase 4 subunit B; K05903 NADH dehydrogenase (quinone) [EC:1.6.99.5]
Hydrogenase 4 subunit B n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZGM4_9PROT
Hydrogenase 4 subunit B {ECO:0000313|EMBL:EKM98690.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_541_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3591..4553
DNA (963bp) protein (321aa)
Respiratory-chain NADH dehydrogenase subunit 1 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YIJ0_9PROT
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:EKM98691.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative NADH dehydrogenase
04302015_20_scaffold_541_4
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4553..5209
DNA (657bp) protein (219aa)
hyfE; hydrogenase-4 membrane subunit E; K12140 hydrogenase-4 component E [EC:1.-.-.-]
Putative hydrogenase-4 component E n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YV37_9PROT
Hydrogenase 4 membrane component (E) {ECO:0000313|EMBL:GAN81260.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_541_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5206..6702
DNA (1497bp) protein (499aa)
Hydrogenase 4 subunit F n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUG4_9PROT
NADH dehydrogenase {ECO:0000313|EMBL:GAN81259.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hyfF; hydrogenase-4 membrane subunit F
04302015_20_scaffold_541_6
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6702..8135
DNA (1434bp) protein (478aa)
Hydrogenase-4 subunit G n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XPV5_9PROT
NADH-ubiquinone oxidoreductase 49kDa subunit {ECO:0000313|EMBL:GAN81258.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
NADH-ubiquinone oxidoreductase chain 49kDa
04302015_20_scaffold_541_7
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8135..8659
DNA (525bp) protein (175aa)
Hydrogenase-4 Fe-S subunit I n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XQ68_9PROT
Hydrogenase-4 Fe-S subunit I {ECO:0000313|EMBL:EKM98814.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
Ni,Fe-hydrogenase III small subunit
04302015_20_scaffold_541_8
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8771..9916
DNA (1146bp) protein (382aa)
NAD(P) transhydrogenase subunit alpha; K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase subunit alpha {ECO:0000313|EMBL:EGO96629.1}; EC=1.6.1.2 {ECO:0000313|EMBL:EGO96629.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
NAD(P) transhydrogenase subunit alpha n=3 Tax=Acidiphilium RepID=F0J1K6_ACIMA
04302015_20_scaffold_541_9
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9932..10327
DNA (396bp) protein (132aa)
pntAB; NAD(P) transhydrogenase alpha subunit 2 (EC:1.6.1.2); K00324 NAD(P) transhydrogenase subunit alpha [EC:1.6.1.2]
NAD(P) transhydrogenase alpha subunit 2 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YWB3_9PROT
NAD/NADP transhydrogenase subunit alpha {ECO:0000313|EMBL:GAN79752.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_541_10
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10332..11735
DNA (1404bp) protein (468aa)
NAD(P) transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; EC=1.6.1.2 {ECO:0000256|PIRNR:PIRNR000204};; Nicotinamide nucleotide transhydrogenase subunit beta {ECO:0000256|PIRNR:PIRNR000204}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
pntB; NAD(P) transhydrogenase beta subunit (EC:1.6.1.2); K00325 NAD(P) transhydrogenase subunit beta [EC:1.6.1.2]
NAD(P) transhydrogenase subunit beta n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XRN2_9PROT
04302015_20_scaffold_541_11
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11985..14315
DNA (2331bp) protein (777aa)
Carbon-monoxide dehydrogenase (Acceptor) n=2 Tax=Acidiphilium RepID=F7SA36_9PROT
Carbon monoxide dehydrogenase/molybdopterin binding aldehyde oxidase {ECO:0000313|EMBL:GAN75800.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
putative oxidoreductase
04302015_20_scaffold_541_12
Idiomarina salinarum, Idiomarina, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14358..16133)
DNA (1776bp) protein (592aa)
Na+/anion symporter n=2 Tax=Idiomarina loihiensis RepID=Q5QWF0_IDILO rbh
Potassium transporter TrkA {ECO:0000313|EMBL:KFZ31080.1}; TaxID=435908 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Idiomarinaceae; Idiomarina.;" source="Idiomarina salinarum.;"
Na+/anion symporter rbh
04302015_20_scaffold_541_13
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16243..17244
DNA (1002bp) protein (334aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036DE753
3-hydroxyisobutyryl-CoA hydrolase/enoyl-CoA hydratase {ECO:0000313|EMBL:GAN77967.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein rbh
04302015_20_scaffold_541_14
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17225..17962)
DNA (738bp) protein (246aa)
Putative glycosyltransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZMX2_9PROT
Putative glycosyltransferase {ECO:0000313|EMBL:EKN00651.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
WecB/TagA/CpsF glycosyl transferase
04302015_20_scaffold_541_15
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17959..19209)
DNA (1251bp) protein (417aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYP4_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:KDM67829.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
04302015_20_scaffold_541_16
unknown

Not on your lists

19305..19811
DNA (507bp) protein (169aa)

This feature has no annotations

04302015_20_scaffold_541_17
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19913..20812
DNA (900bp) protein (300aa)
putative acyltransferase (EC:2.3.1.-)
Acyltransferase 3 n=1 Tax=Acidiphilium sp. PM RepID=F7S7P6_9PROT
Acyltransferase 3 {ECO:0000313|EMBL:EGO94831.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_541_18
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20821..21042
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5FYP7_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ80913.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_541_19
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21257..21937
DNA (681bp) protein (227aa)
Uncharacterized protein n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2ILK8_9BURK
Uncharacterized protein {ECO:0000313|EMBL:EIF31610.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. Ch1-1.;"
transmembrane protein
04302015_20_scaffold_541_20
unknown

Not on your lists

comp(21841..22077)
DNA (237bp) protein (79aa)

This feature has no annotations

Displaying 20 items

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