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04302015_20_scaffold_1518

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_1518_1
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3..857)
DNA (855bp) protein (285aa)
Efflux pump component, secretion protein HlyD family n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2V8_9PROT
Efflux pump component, secretion protein HlyD family {ECO:0000313|EMBL:EKN01248.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_20_scaffold_1518_2
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(871..1077)
DNA (207bp) protein (69aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z293_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN81421.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_1518_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1074..3092)
DNA (2019bp) protein (673aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XXF8_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN01250.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative efflux transporter permease
04302015_20_scaffold_1518_4
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3095..4027)
DNA (933bp) protein (311aa)
cysK; cysteine synthase A (EC:2.5.1.47); K01738 cysteine synthase A [EC:2.5.1.47]
Cysteine synthase {ECO:0000256|RuleBase:RU003985}; EC=2.5.1.47 {ECO:0000256|RuleBase:RU003985};; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;" source="Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath).;"
Cysteine synthase A n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q60A49_METCA
04302015_20_scaffold_1518_5
Rhodospirillum centenum, Rhodospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4080..5045)
DNA (966bp) protein (322aa)
Hydrolase, alpha n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) RepID=B6IQI9_RHOCS rbh
hydrolase, alpha rbh
Hydrolase, alpha {ECO:0000313|EMBL:ACI97725.1}; TaxID=414684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Rhodospirillum.;" source="Rhodospirillum centenum (strain ATCC 51521 / SW).;"
04302015_20_scaffold_1518_6
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5042..5551)
DNA (510bp) protein (170aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FX30_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ30162.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_1518_7
unknown

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5562..6077
DNA (516bp) protein (172aa)

This feature has no annotations

04302015_20_scaffold_1518_8
unknown

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comp(6104..6310)
DNA (207bp) protein (69aa)

This feature has no annotations

04302015_20_scaffold_1518_9
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6714..8417)
DNA (1704bp) protein (568aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP-Rule:MF_00071}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
Elongation factor 4 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XTN6_9PROT
GTP-binding protein LepA; K03596 GTP-binding protein LepA
04302015_20_scaffold_1518_10
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(8436..9455)
DNA (1020bp) protein (340aa)
Aspartyl-tRNA ligase {ECO:0000313|EMBL:EKN00237.1}; EC=6.1.1.12 {ECO:0000313|EMBL:EKN00237.1};; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12]
Aspartate--tRNA ligase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YN23_9PROT
Displaying 10 items

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