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04302015_20_scaffold_160

Search features with annotation key words

Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_160_1
unknown

Not on your lists

comp(1..63)
DNA (63bp) protein (21aa)

This feature has no annotations

04302015_20_scaffold_160_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(334..1041)
DNA (708bp) protein (236aa)
GntR family transcriptional regulator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YM35_9PROT rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:EKM99916.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
GntR family transcriptional regulator
04302015_20_scaffold_160_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1143..2186
DNA (1044bp) protein (348aa)
aminocarboxymuconate-semialdehyde decarboxylase (EC:4.1.1.45); K03392 aminocarboxymuconate-semialdehyde decarboxylase [EC:4.1.1.45] rbh
Aminocarboxymuconate-semialdehyde decarboxylase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZKI5_9PROT rbh
Aminocarboxymuconate-semialdehyde decarboxylase {ECO:0000313|EMBL:EKM99915.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_160_4
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2176..3099
DNA (924bp) protein (308aa)
metapyrocatechase (EC:1.13.11.2); K00446 catechol 2,3-dioxygenase [EC:1.13.11.2] rbh
Metapyrocatechase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XTH1_9PROT rbh
Metapyrocatechase {ECO:0000313|EMBL:EKM99914.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_160_5
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3202..4836
DNA (1635bp) protein (545aa)
FAD-binding monooxygenase (EC:1.14.13.-); K05712 3-(3-hydroxy-phenyl)propionate hydroxylase [EC:1.14.13.127] rbh
FAD-binding monooxygenase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YY48_9PROT rbh
FAD-binding monooxygenase {ECO:0000313|EMBL:EKM99913.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_160_6
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4817..5662
DNA (846bp) protein (282aa)
isomerase/decarboxylase protein (EC:4.1.1.68 5.3.3.10) rbh
Bifunctional enzyme with isomerase/decarboxylase activity n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YYR6_9PROT rbh
Bifunctional enzyme with isomerase/decarboxylase activity {ECO:0000313|EMBL:EKM99912.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_160_7
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5730..7070
DNA (1341bp) protein (447aa)
Major facilitator superfamily permease n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YM30_9PROT rbh
Major facilitator superfamily permease {ECO:0000313|EMBL:EKM99911.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
major facilitator superfamily permease rbh
04302015_20_scaffold_160_8
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7114..8010
DNA (897bp) protein (299aa)
Phenol degradation meta-pathway protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZKI0_9PROT rbh
Phenol degradation meta-pathway protein {ECO:0000313|EMBL:EKM99910.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
phenol degradation meta-pathway protein
04302015_20_scaffold_160_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8247..9791)
DNA (1545bp) protein (515aa)
Probable transporter n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98I34_RHILO
Transporter {ECO:0000313|EMBL:GAN76794.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
transporter
04302015_20_scaffold_160_10
Mesorhizobium sp. ORS3359, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9803..10945)
DNA (1143bp) protein (381aa)
Probable secretion protein n=1 Tax=Rhizobium loti (strain MAFF303099) RepID=Q98I33_RHILO
Putative secretion protein {ECO:0000313|EMBL:CDX44165.1}; TaxID=1505933 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. ORS3359.;"
secretion protein; K03543 multidrug resistance protein A
04302015_20_scaffold_160_11
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10992..11456)
DNA (465bp) protein (155aa)
Orf_Bo157 n=1 Tax=Rhizobium radiobacter RepID=A5WY73_RHIRD
Uncharacterized protein {ECO:0000313|EMBL:AHE53466.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sanxanigenens DSM 19645 = NX02.;"
hypothetical protein
04302015_20_scaffold_160_12
unknown

Not on your lists

comp(11529..11690)
DNA (162bp) protein (54aa)

This feature has no annotations

04302015_20_scaffold_160_13
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11767..12324
DNA (558bp) protein (186aa)
Putative Transcriptional regulator, TetR family n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S5L2_9BRAD
Putative Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCD89489.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 285.;"
transcriptional regulator
04302015_20_scaffold_160_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12799..13062)
DNA (264bp) protein (88aa)
Cell division topological specificity factor n=3 Tax=Acidiphilium RepID=MINE_ACICJ
cell division topological specificity factor MinE; K03608 cell division topological specificity factor
Cell division topological specificity factor {ECO:0000255|HAMAP-Rule:MF_00262}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_160_15
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13059..13874)
DNA (816bp) protein (272aa)
Site-determining protein n=3 Tax=Acidiphilium RepID=A5G010_ACICJ rbh
septum site-determining protein MinD; K03609 septum site-determining protein MinD rbh
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_160_16
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13885..14559)
DNA (675bp) protein (225aa)
Probable septum site-determining protein MinC n=2 Tax=Acidiphilium RepID=F0J0P7_ACIMA rbh
minC; septum site-determining protein MinC; K03610 septum site-determining protein MinC rbh
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_160_17
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14762..15742)
DNA (981bp) protein (327aa)
Oxidoreductase domain protein n=2 Tax=Acidiphilium RepID=A5G012_ACICJ rbh
oxidoreductase domain-containing protein rbh
Oxidoreductase domain protein {ECO:0000313|EMBL:ABQ31194.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_160_18
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15834..17414
DNA (1581bp) protein (527aa)
Protein translocase subunit SecD n=2 Tax=Acidiphilium RepID=F0J0P9_ACIMA rbh
secD; protein-export membrane protein SecD; K03072 preprotein translocase subunit SecD rbh
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_160_19
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17425..18405
DNA (981bp) protein (327aa)
Protein-export membrane protein SecF n=2 Tax=Acidiphilium RepID=F0J0Q0_ACIMA rbh
secF; protein-export membrane protein SecF rbh
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_160_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18566..19288)
DNA (723bp) protein (241aa)
Lipolytic enzyme, G-D-S-L family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G014_ACICJ rbh
GDSL family lipase rbh
Lipolytic enzyme, G-D-S-L family {ECO:0000313|EMBL:ABQ31196.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_160_21
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19266..20372)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J0Q3_ACIMA rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:BAJ81589.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_160_22
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20369..20959)
DNA (591bp) protein (197aa)
Recombination protein RecR n=2 Tax=Acidiphilium RepID=F0J0Q4_ACIMA rbh
recR; recombination protein RecR; K06187 recombination protein RecR rbh
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_160_23
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20985..21308)
DNA (324bp) protein (108aa)
Nucleoid-associated protein ACMV_22440 n=2 Tax=Acidiphilium RepID=F0J0Q5_ACIMA
hypothetical protein; K09747 hypothetical protein
Nucleoid-associated protein Acry_1999 {ECO:0000255|HAMAP-Rule:MF_00274}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_160_24
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21308..23221)
DNA (1914bp) protein (638aa)
DNA polymerase III gamma/tau subunit {ECO:0000313|EMBL:BAJ81592.1}; EC=2.7.7.7 {ECO:0000313|EMBL:BAJ81592.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
dnaX; DNA polymerase III subunit gamma/tau (EC:2.7.7.7); K02343 DNA polymerase III subunit gamma/tau [EC:2.7.7.7] rbh
DNA polymerase III gamma/tau subunit n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0Q6_ACIMA rbh
04302015_20_scaffold_160_25
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23429..24340
DNA (912bp) protein (304aa)
NUDIX hydrolase; K03426 NAD+ diphosphatase [EC:3.6.1.22] rbh
NUDIX hydrolase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G019_ACICJ rbh
NUDIX hydrolase {ECO:0000313|EMBL:ABQ31201.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_160_26
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24431..25030
DNA (600bp) protein (200aa)
NAD(P)H dehydrogenase (quinone) {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138}; EC=1.6.5.2 {ECO:0000256|HAMAP-Rule:MF_01017, ECO:0000256|SAAS:SAAS00064138};; NAD(P)H:quinone oxidoreductase {ECO:0000256|HAMAP-Rule:MF_01017}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
NAD(P)H dehydrogenase (quinone) n=2 Tax=Acidiphilium RepID=NQOR_ACICJ rbh
wrbA; flavoprotein WrbA; K03809 Trp repressor binding protein rbh
04302015_20_scaffold_160_27
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25242..26171
DNA (930bp) protein (310aa)
Acid phosphatase {ECO:0000313|EMBL:EGO96364.1}; EC=3.1.3.2 {ECO:0000313|EMBL:EGO96364.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Acid phosphatase n=1 Tax=Acidiphilium sp. PM RepID=F7S3E0_9PROT rbh
putative phosphatase rbh
04302015_20_scaffold_160_28
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26190..28217)
DNA (2028bp) protein (676aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S3E1_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EGO96365.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein rbh
04302015_20_scaffold_160_29
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28214..30910)
DNA (2697bp) protein (899aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S3E2_9PROT rbh
Uncharacterized protein {ECO:0000313|EMBL:EGO96366.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
hypothetical protein rbh
04302015_20_scaffold_160_30
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30907..31758)
DNA (852bp) protein (284aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=A5G024_ACICJ rbh
Uncharacterized protein {ECO:0000313|EMBL:KDM66892.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein rbh
Displaying items 1-30 of 46 in total

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