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04302015_20_scaffold_114

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Displaying items 1-30 of 68 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_114_1
Acetobacter indonesiensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..494)
DNA (492bp) protein (164aa)
Putative glycosyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J3G8_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:GAN62296.1}; TaxID=1231340 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter indonesiensis 5H-1.;"
putative glycosyltransferase
04302015_20_scaffold_114_2
Roseomonas cervicalis, Roseomonas, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(719..1774)
DNA (1056bp) protein (352aa)
ABC transporter, permease protein n=1 Tax=Roseomonas cervicalis ATCC 49957 RepID=D5RKN2_9PROT
ABC transporter, permease protein {ECO:0000313|EMBL:EFH12133.1}; TaxID=525371 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Roseomonas.;" source="Roseomonas cervicalis ATCC 49957.;"
oligopeptide transport system permease oppB; K13894 microcin C transport system permease protein
04302015_20_scaffold_114_3
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1771..3606)
DNA (1836bp) protein (612aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI0003796E0D rbh
Oligopeptide-binding protein OppA {ECO:0000313|EMBL:GAN77846.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
oligopeptide-binding protein oppA; K13893 microcin C transport system substrate-binding protein
04302015_20_scaffold_114_4
Komagataeibacter hansenii, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3603..4391)
DNA (789bp) protein (263aa)
Inositol monophosphatase n=1 Tax=Gluconacetobacter hansenii ATCC 23769 RepID=D5QFT0_GLUHA
Inositol monophosphatase {ECO:0000313|EMBL:EFG83986.1}; TaxID=714995 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter hansenii ATCC 23769.;"
inositol monophosphatase
04302015_20_scaffold_114_5
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4400..5329)
DNA (930bp) protein (310aa)
Putative cytochrome c n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZGX4_9PROT
Putative cytochrome c {ECO:0000313|EMBL:EKM98785.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative cytochrome c; K08738 cytochrome c
04302015_20_scaffold_114_6
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5458..6165
DNA (708bp) protein (236aa)
3-deoxy-manno-octulosonate cytidylyltransferase (EC:2.7.7.38); K00979 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|SAAS:SAAS00089008};; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
hypothetical protein n=1 Tax=Roseomonas sp. B5 RepID=UPI0002E6E310
04302015_20_scaffold_114_7
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6177..7013
DNA (837bp) protein (279aa)
pheA; prephenate dehydratase (EC:4.2.1.51); K04518 prephenate dehydratase [EC:4.2.1.51]
Prephenate dehydratase {ECO:0000313|EMBL:EGO95177.1}; EC=4.2.1.51 {ECO:0000313|EMBL:EGO95177.1};; EC=4.2.1.91 {ECO:0000313|EMBL:EGO95177.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Prephenate dehydratase n=3 Tax=Acidiphilium RepID=A5FW81_ACICJ
04302015_20_scaffold_114_8
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8005..8796)
DNA (792bp) protein (264aa)
carbon-monoxide dehydrogenase (EC:1.2.99.2); K03519 carbon-monoxide dehydrogenase medium subunit [EC:1.2.99.2]
Carbon-monoxide dehydrogenase (Acceptor) {ECO:0000313|EMBL:EGO95619.1}; EC=1.2.99.2 {ECO:0000313|EMBL:EGO95619.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Carbon-monoxide dehydrogenase (Acceptor) n=3 Tax=Acidiphilium RepID=A5FUM4_ACICJ
04302015_20_scaffold_114_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8814..11195)
DNA (2382bp) protein (794aa)
Xanthine dehydrogenase, molybdenum binding subunit apoprotein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUM3_ACICJ
Carbon monoxide dehydrogenase/molybdopterin binding aldehyde oxidase {ECO:0000313|EMBL:GAN76856.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
molybdopterin binding aldehyde oxidase and xanthine dehydrogenase
04302015_20_scaffold_114_10
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11273..11770)
DNA (498bp) protein (166aa)
2Fe-2S iron-sulfur cluster binding domain-containing protein; K03518 carbon-monoxide dehydrogenase small subunit [EC:1.2.99.2]
Carbon monoxide dehydrogenase small chain {ECO:0000313|EMBL:KDM68623.1}; EC=1.2.99.2 {ECO:0000313|EMBL:KDM68623.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
(2Fe-2S)-binding domain protein n=3 Tax=Acidiphilium RepID=A5FUM2_ACICJ
04302015_20_scaffold_114_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11919..12347
DNA (429bp) protein (143aa)
GtrA family protein n=1 Tax=Acidiphilium sp. PM RepID=F7S5G7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80173.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_114_12
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12434..13858
DNA (1425bp) protein (475aa)
Sugar transferase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FUM0_ACICJ
sugar transferase
Sugar transferase {ECO:0000313|EMBL:ABQ29302.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_114_13
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13848..14852
DNA (1005bp) protein (335aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00035CBC44 rbh
Glycosyl transferase family 2 {ECO:0000313|EMBL:GAN81087.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
family 2 glycosyl transferase rbh
04302015_20_scaffold_114_14
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14852..15832
DNA (981bp) protein (327aa)
Putative glycosyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J161_ACIMA
putative glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:BAJ79443.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_114_15
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15936..16121
DNA (186bp) protein (62aa)
hypothetical protein n=1 Tax=Methylopila sp. M107 RepID=UPI00037FEFC0
Stress response protein CsbD {ECO:0000313|EMBL:GAN77323.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
CsbD-like protein
04302015_20_scaffold_114_16
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16309..16569
DNA (261bp) protein (87aa)
transglycosylase n=1 Tax=Roseomonas sp. B5 RepID=UPI0002DECE6F
Putative membrane protein {ECO:0000313|EMBL:EIM30258.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;"
transglycosylase
04302015_20_scaffold_114_17
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16737..17591
DNA (855bp) protein (285aa)
N-formylglutamate amidohydrolase; K01458 N-formylglutamate deformylase [EC:3.5.1.68]
N-formylglutamate amidohydrolase n=1 Tax=Acidiphilium sp. PM RepID=F7S532_9PROT
N-formylglutamate amidohydrolase {ECO:0000313|EMBL:EGO95745.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_114_18
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17863..18666
DNA (804bp) protein (268aa)
Lytic transglycosylase, catalytic n=1 Tax=Acidiphilium sp. PM RepID=F7S6X4_9PROT
lytic transglycosylase
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABQ32088.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_114_19
unknown

Not on your lists

19584..20135
DNA (552bp) protein (184aa)

This feature has no annotations

04302015_20_scaffold_114_20
Frateuria aurantia, Frateuria, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20335..21030)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB 13370) RepID=H8L556_FRAAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC86635.1}; TaxID=767434 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Frateuria.;" source="Frateuria aurantia (strain ATCC 33424 / DSM 6220 / NBRC 3245 / NCIMB; 13370) (Acetobacter aurantius).;"
04302015_20_scaffold_114_21
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21111..21662)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037FA4EC
UPF0301 protein Asru_0086_05 {ECO:0000256|HAMAP-Rule:MF_00758}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
transcriptional regulator, algH; K07735 putative transcriptional regulator
04302015_20_scaffold_114_22
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21842..22321
DNA (480bp) protein (160aa)
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin {ECO:0000313|EMBL:BAJ81495.1}; EC=1.11.1.15 {ECO:0000313|EMBL:BAJ81495.1};; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
Redoxin domain-containing protein n=2 Tax=Acidiphilium RepID=F7S7D8_9PROT
04302015_20_scaffold_114_23
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22284..23423
DNA (1140bp) protein (380aa)
putative glycosyltransferase; K00721 dolichol-phosphate mannosyltransferase [EC:2.4.1.83]
Putative glycosyltransferase n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J0D4_ACIMA
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:GAN80981.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_114_24
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23378..24829
DNA (1452bp) protein (484aa)
Glycosyl transferase, family 39 n=2 Tax=Acidiphilium RepID=A5FZS2_ACICJ
glycosyl transferase family protein
Glycosyl transferase, family 39 {ECO:0000313|EMBL:ABQ31104.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_114_25
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24829..25812
DNA (984bp) protein (328aa)
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit {ECO:0000313|EMBL:EGO94430.1}; EC=4.3.1.16 {ECO:0000313|EMBL:EGO94430.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
putative threonine dehydratase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19]
Pyridoxal-5'-phosphate-dependent enzyme, beta subunit n=1 Tax=Acidiphilium sp. PM RepID=F7S8T8_9PROT
04302015_20_scaffold_114_26
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25881..26954
DNA (1074bp) protein (358aa)
Chemotaxis protein MotB n=2 Tax=Acidiphilium RepID=F0J0D1_ACIMA
motB; chemotaxis protein MotB; K02557 chemotaxis protein MotB
Chemotaxis protein MotB {ECO:0000313|EMBL:BAJ81491.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_114_27
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26968..27837
DNA (870bp) protein (290aa)
Chemotaxis protein MotA n=2 Tax=Acidiphilium RepID=F0J0D0_ACIMA
motA; chemotaxis protein MotA; K02556 chemotaxis protein MotA
Flagellar motor protein MotA {ECO:0000313|EMBL:EGO94432.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_114_28
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27853..28377)
DNA (525bp) protein (175aa)
putative acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
GCN5-related N-acetyltransferase n=3 Tax=Acidiphilium RepID=A5FZR8_ACICJ
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ABQ31100.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_114_29
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28659..30944
DNA (2286bp) protein (762aa)
ABC transporter related protein n=2 Tax=Acidiphilium RepID=A5FZR7_ACICJ
ABC transporter-like protein
ABC transporter-like protein {ECO:0000313|EMBL:EGO94434.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_114_30
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30907..32343
DNA (1437bp) protein (479aa)
Type I secretion membrane fusion protein, HlyD family n=3 Tax=Acidiphilium RepID=A5FZR6_ACICJ
HlyD family secretion protein
HlyD family type I secretion membrane fusion protein {ECO:0000313|EMBL:KDM68178.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Displaying items 1-30 of 68 in total

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