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04302015_20_scaffold_293

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Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_293_1
Afipia sp. P52-10, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2..844)
DNA (843bp) protein (281aa)
Acetyl-coenzyme A synthetase n=1 Tax=Burkholderia vietnamiensis AU4i RepID=U2GCN9_BURVI
AMP-binding protein {ECO:0000313|EMBL:ETR78351.1}; TaxID=1429916 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia sp. P52-10.;"
acyl-CoA synthetase (AMP-forming)/AMP-acid ligase
04302015_20_scaffold_293_2
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1067..2233
DNA (1167bp) protein (389aa)
acyl-CoA dehydrogenase domain-containing protein; K00253 isovaleryl-CoA dehydrogenase [EC:1.3.8.4]
Acyl-CoA dehydrogenase domain protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VL98_CAUST
Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
04302015_20_scaffold_293_3
Caulobacter sp. K31, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2233..3855
DNA (1623bp) protein (541aa)
propionyl-CoA carboxylase (EC:6.4.1.3); K01969 3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4] rbh
Propionyl-CoA carboxylase {ECO:0000313|EMBL:ABZ72281.1}; EC=6.4.1.3 {ECO:0000313|EMBL:ABZ72281.1};; TaxID=366602 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter sp. (strain K31).;"
Propionyl-CoA carboxylase n=1 Tax=Caulobacter sp. (strain K31) RepID=B0T2N0_CAUSK rbh
04302015_20_scaffold_293_4
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3858..5729
DNA (1872bp) protein (624aa)
carbamoyl-phosphate synthase subunit L; K01968 3-methylcrotonyl-CoA carboxylase alpha subunit [EC:6.4.1.4] rbh
Carbamoyl-phosphate synthase L chain ATP-binding protein n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VL92_CAUST rbh
Carbamoyl-phosphate synthase L chain ATP-binding protein {ECO:0000313|EMBL:ADG11265.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
04302015_20_scaffold_293_5
Hirschia baltica, Hirschia, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5732..6184
DNA (453bp) protein (151aa)
MaoC family dehydratase n=1 Tax=Sphingomonas echinoides RepID=UPI00026CC9E3
MaoC domain-containing protein dehydratase
MaoC domain protein dehydratase {ECO:0000313|EMBL:ACT59289.1}; TaxID=582402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hirschia.;" source="Hirschia baltica (strain ATCC 49814 / DSM 5838 / IFAM 1418).;"
04302015_20_scaffold_293_6
Achromobacter xylosoxidans, Achromobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6181..7047
DNA (867bp) protein (289aa)
Citrate lyase n=1 Tax=Advenella kashmirensis W13003 RepID=V8QX92_9BURK
Citrate lyase {ECO:0000313|EMBL:KGY26820.1}; TaxID=85698 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Alcaligenes xylosoxydans xylosoxydans (Achromobacter xylosoxidans).;"
HpcH/HpaI aldolase/citrate lyase family
04302015_20_scaffold_293_7
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7072..8745
DNA (1674bp) protein (558aa)
AMP-binding domain-containing protein; K00666 fatty-acyl-CoA synthase [EC:6.2.1.-]
AMP-dependent synthetase and ligase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UEN9_METS4
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACA16779.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
04302015_20_scaffold_293_8
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8805..9242)
DNA (438bp) protein (146aa)
Uncharacterized protein {ECO:0000313|EMBL:GAN79338.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_293_9
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9249..10463)
DNA (1215bp) protein (405aa)
Flp pilus assembly protein ATPase CpaE-like protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YR50_9PROT
Pilus assembly protein {ECO:0000313|EMBL:GAN76618.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
Flp pilus assembly protein ATPase CpaE-like protein; K02282 pilus assembly protein CpaE
04302015_20_scaffold_293_10

Not on your lists

comp(10956..11723)
DNA (768bp) protein (256aa)
Mannan polymerase complexes MNN9 subunit n=1 Tax=Streptomyces viridochromogenes DSM 40736 RepID=D9XC64_STRVR
Uncharacterized protein {ECO:0000313|EMBL:AKA59402.1}; TaxID=1630011 species="Bacteria; environmental samples.;" source="uncultured bacterium AB_162.;"
hypothetical protein
04302015_20_scaffold_293_11
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

11805..13328
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XAV4_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EEF63139.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
04302015_20_scaffold_293_12
BJP_08E140C01_Syntrophobacterales_43_19, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13325..14539
DNA (1215bp) protein (405aa)
Glycosyl transferases group 1 n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KYA6_THERP
glycosyl transferase family protein
Tax=BJP_08E140C01_Syntrophobacterales_43_19
04302015_20_scaffold_293_13
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

14572..14835
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A4S9_9ACTN
hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
04302015_20_scaffold_293_14
unknown

Not on your lists

14832..15650
DNA (819bp) protein (273aa)

This feature has no annotations

04302015_20_scaffold_293_15
GWF2_Sideroxydans_59_14_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15866..16276
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Afipia birgiae RepID=UPI0002F95444
hypothetical protein
Tax=GWF2_Sideroxydans_59_14_curated
04302015_20_scaffold_293_16
R_Dadabacteria_53_21, Dadabacteria, Bacteria

Not on your lists

16309..17427
DNA (1119bp) protein (373aa)
glycosyltransferase (EC:2.4.-.-)
Glycosyltransferase n=1 Tax=Ilumatobacter coccineus YM16-304 RepID=M5A5Y2_9ACTN
Tax=RIFCSPHIGHO2_12_FULL_Dadabacteria_53_21_curated
04302015_20_scaffold_293_17
Bradyrhizobium sp. CCGE-LA001, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17377..18552)
DNA (1176bp) protein (392aa)
hypothetical protein n=1 Tax=Bradyrhizobium japonicum RepID=UPI00036DA0C4
Uncharacterized protein {ECO:0000313|EMBL:EJZ30894.1}; TaxID=1223566 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. CCGE-LA001.;"
hypothetical protein
04302015_20_scaffold_293_18
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18622..20469)
DNA (1848bp) protein (616aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00037DAB21
TRAP C4-dicarboxylate transport system permease DctM {ECO:0000313|EMBL:GAN81609.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative TRAP-type C4-dicarboxylate transport system, fusion of small and large permease proteins DctQ/DctM domains
04302015_20_scaffold_293_19
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20537..21544)
DNA (1008bp) protein (336aa)
hypothetical protein n=1 Tax=Bordetella sp. FB-8 RepID=UPI00035E3CEA
TRAP dicarboxylate transporter subunit DctP {ECO:0000313|EMBL:GAN81610.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
TRAP dicarboxylate transporter DctP subunit
04302015_20_scaffold_293_20
Burkholderia glathei, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21687..22847)
DNA (1161bp) protein (387aa)
Carnitine dehydratase {ECO:0000313|EMBL:KDR39069.1}; L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:CDY78890.1}; EC=2.8.3.16 {ECO:0000313|EMBL:CDY78890.1};; TaxID=60547 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia glathei.;"
CoA transferase n=1 Tax=Massilia niastensis RepID=UPI000360D176 rbh
L-carnitine dehydratase/bile acid-inducible protein F rbh
04302015_20_scaffold_293_21
Methylobacterium sp. GXF4, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22884..23897)
DNA (1014bp) protein (338aa)
Aldo/keto reductase n=1 Tax=Methylobacterium sp. GXF4 RepID=I9CQL4_9RHIZ rbh
Aldo/keto reductase {ECO:0000313|EMBL:EIZ86437.1}; TaxID=1096546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. GXF4.;"
aldo/keto reductase rbh
Displaying 21 items

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