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04302015_20_scaffold_423

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_423_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..152)
DNA (150bp) protein (50aa)
MotA/TolQ/ExbB proton channel n=1 Tax=Acidithiobacillus ferrivorans SS3 RepID=G0JQA4_9GAMM
Proton channel/TonB-dependent biopolymer transporter MotA/TolQ/ExbB {ECO:0000313|EMBL:GAN79638.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
MotA/TolQ/ExbB proton channel; K03561 biopolymer transport protein ExbB
04302015_20_scaffold_423_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(226..1341)
DNA (1116bp) protein (372aa)
FAD dependent oxidoreductase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XPD0_9PROT rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:EKM98539.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
electron transfer oxidoreductase
04302015_20_scaffold_423_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1338..2036)
DNA (699bp) protein (233aa)
ubiG2; 3-demethylubiquinone-9 3-O-methyltransferase (EC:2.1.1.64)
3-demethylubiquinone-9 3-methyltransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YU01_9PROT
3-demethylubiquinone-9 3-methyltransferase {ECO:0000313|EMBL:EKM98538.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_423_4
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2036..3103)
DNA (1068bp) protein (356aa)
chalcone synthase (EC:2.3.1.74) rbh
Naringenin-chalcone synthase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YUK6_9PROT
Naringenin-chalcone synthase {ECO:0000313|EMBL:EKM98537.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_423_5
Brucella canis, Brucella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3196..4074)
DNA (879bp) protein (293aa)
mmsB; 3-hydroxyisobutyrate dehydrogenase; K00020 3-hydroxyisobutyrate dehydrogenase [EC:1.1.1.31]
3-hydroxyisobutyrate dehydrogenase {ECO:0000256|RuleBase:RU910714}; Short=HIBADH {ECO:0000256|RuleBase:RU910714};; EC=1.1.1.31 {ECO:0000256|RuleBase:RU910714};; TaxID=483179 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Brucellaceae; Brucella.;" source="Brucella canis (strain ATCC 23365 / NCTC 10854).;"
3-hydroxyisobutyrate dehydrogenase n=20 Tax=Brucella RepID=A9M5X6_BRUC2
04302015_20_scaffold_423_6
Bosea sp. LC85, Bosea, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4074..5246)
DNA (1173bp) protein (391aa)
Isobutyryl-CoA dehydrogenase n=1 Tax=Azospirillum sp. (strain B510) RepID=D3P6M7_AZOS1 rbh
Acyl-CoA dehydrogenase domain protein {ECO:0000313|EMBL:KFC75469.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;"
isobutyryl-CoA dehydrogenase rbh
04302015_20_scaffold_423_7
Amycolatopsis azurea, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5484..6980)
DNA (1497bp) protein (499aa)
methylmalonate-semialdehyde dehydrogenase; K00140 malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase [EC:1.2.1.18 1.2.1.27]
Methylmalonate-semialdehyde dehydrogenase n=1 Tax=Amycolatopsis azurea DSM 43854 RepID=M2QFL5_9PSEU
Methylmalonate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EMD24807.1}; TaxID=1238180 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis azurea DSM 43854.;"
04302015_20_scaffold_423_8
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7103..7729)
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Xanthobacteraceae RepID=UPI0003816A07
Transcriptional negative regulator {ECO:0000313|EMBL:GAN78814.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
transcriptional regulator; K07734 transcriptional regulator
04302015_20_scaffold_423_9
Leptospira inadai, Leptospira, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(7742..8524)
DNA (783bp) protein (261aa)
Putative lysophospholipase n=1 Tax=Leptospira inadai serovar Lyme str. 10 RepID=V6HDA9_9LEPT
Putative lysophospholipase {ECO:0000313|EMBL:EQA38066.1}; TaxID=1049790 species="Bacteria; Spirochaetes; Leptospirales; Leptospiraceae; Leptospira.;" source="Leptospira inadai serovar Lyme str. 10.;"
hydrolase or acyltransferase
04302015_20_scaffold_423_10
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8579..9571)
DNA (993bp) protein (331aa)
aldo/keto reductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDDC2
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ACA15174.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium sp. (strain 4-46).;"
04302015_20_scaffold_423_11
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9657..10439)
DNA (783bp) protein (261aa)
O-antigen ABC transporter ATP-binding protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J814_ACIMA
ABC transporter O-antigene exporter ATP-binding protein {ECO:0000313|EMBL:GAN78816.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
O-antigen ABC transporter ATP-binding protein; K09691 lipopolysaccharide transport system ATP-binding protein
04302015_20_scaffold_423_12
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10442..11221)
DNA (780bp) protein (260aa)
ABC-2 type transporter n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWH9_ACICJ
ABC-2 type transporter; K09690 lipopolysaccharide transport system permease protein
ABC-2 type transporter {ECO:0000313|EMBL:ABQ29961.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_423_13
unknown

Not on your lists

comp(11400..11768)
DNA (369bp) protein (123aa)

This feature has no annotations

04302015_20_scaffold_423_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11979..13199
DNA (1221bp) protein (407aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J4Y3_ACIMA
hypothetical protein
Lytic transglycosylase, catalytic {ECO:0000313|EMBL:ABQ31848.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_423_15

Not on your lists

comp(13322..14293)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Marinobacter algicola DG893 RepID=A6F543_9ALTE
Uncharacterized protein {ECO:0000313|EMBL:KKL18834.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
04302015_20_scaffold_423_16
Rhizobium sp. YS-1r, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14369..15778)
DNA (1410bp) protein (470aa)
Drug resistance transporter, EmrB/QacA subfamily n=1 Tax=Rhizobium sp. CF080 RepID=J2KNT1_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KGE02369.1}; TaxID=1532558 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" source="Rhizobium sp. YS-1r.;"
major facilitator transporter
04302015_20_scaffold_423_17
Rhodovulum sp. PH10, Rhodovulum, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15904..17313
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Rhodovulum sp. PH10 RepID=J6UH88_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:EJW13321.1}; TaxID=1187851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodovulum.;" source="Rhodovulum sp. PH10.;"
hypothetical protein
04302015_20_scaffold_423_18
Oceanibaculum indicum, Oceanibaculum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17386..18039
DNA (654bp) protein (218aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Uncharacterized protein n=1 Tax=Oceanibaculum indicum P24 RepID=K2J9S7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKE71577.1}; TaxID=1207063 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Oceanibaculum.;" source="Oceanibaculum indicum P24.;"
Displaying 18 items

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