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04302015_20_scaffold_803

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_803_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1618
DNA (1617bp) protein (539aa)
30S ribosomal protein S1 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZIC9_9PROT
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
04302015_20_scaffold_803_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1768..2088
DNA (321bp) protein (107aa)
Integration host factor subunit beta n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XUB0_9PROT
Integration host factor subunit beta {ECO:0000256|RuleBase:RU003941, ECO:0000256|SAAS:SAAS00062449}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
ihfB; integration host factor beta subunit; K05788 integration host factor subunit beta
04302015_20_scaffold_803_3
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2369..3064
DNA (696bp) protein (232aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FZ93_ACICJ
04302015_20_scaffold_803_4
Acetobacter orleanensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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3061..3699
DNA (639bp) protein (213aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=1231342 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter orleanensis JCM 7639.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
N-(5''''-phosphoribosyl)anthranilate isomerase n=1 Tax=Gluconacetobacter europaeus RepID=UPI0002DFAED7
04302015_20_scaffold_803_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3665..4426)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1R2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80663.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_803_6
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4428..5264)
DNA (837bp) protein (279aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XWZ9_9PROT
04302015_20_scaffold_803_7
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5348..6523
DNA (1176bp) protein (392aa)
Major facilitator transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZPA1_9PROT
Major facilitator transporter {ECO:0000313|EMBL:EKN01076.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative major facilitator superfamily transporter
04302015_20_scaffold_803_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6499..7137)
DNA (639bp) protein (213aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:KDM66178.1}; EC=3.2.2.21 {ECO:0000313|EMBL:KDM66178.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
DNA-3-methyladenine glycosylase II n=2 Tax=Acidiphilium RepID=F0J4W1_ACIMA
04302015_20_scaffold_803_9
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7171..9315)
DNA (2145bp) protein (715aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G1U6_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31828.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_803_10
unknown

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9567..9803
DNA (237bp) protein (79aa)

This feature has no annotations

04302015_20_scaffold_803_11
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9933..10697)
DNA (765bp) protein (255aa)
Pyridoxal-dependent Aromatic-L-amino-acid decarboxylase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z283_9PROT
Pyridoxal-dependent Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:EKN01239.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
pyridoxal-dependent decarboxylase
04302015_20_scaffold_803_12
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10643..11164)
DNA (522bp) protein (174aa)
Pyridoxal-dependent Aromatic-L-amino-acid decarboxylase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z283_9PROT
Pyridoxal-dependent Aromatic-L-amino-acid decarboxylase {ECO:0000313|EMBL:EKN01239.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative decarboxylase
04302015_20_scaffold_803_13
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11249..12364)
DNA (1116bp) protein (372aa)
Extracellular ligand-binding receptor n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1K2_9PROT
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EKN01039.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
extracellular ligand-binding receptor
04302015_20_scaffold_803_14
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12437..13156)
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XWS7_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKN01040.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
04302015_20_scaffold_803_15
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13153..13995)
DNA (843bp) protein (281aa)
livG; high-affinity branched-chain amino acid ABC transporter, ATP-binding component (EC:3.6.3.-) rbh
ABC transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZP36_9PROT
ABC transporter {ECO:0000313|EMBL:EKN01041.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_803_16
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13997..15277)
DNA (1281bp) protein (427aa)
High-affinity branched-chain amino acid transport system permease protein LivM (LIV-I protein M) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YQE3_9PROT
High-affinity branched-chain amino acid transport system permease protein LivM (LIV-I protein M) {ECO:0000313|EMBL:EKN01042.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
livM; high-affinity branched-chain amino acid ABC transporter permease; K01998 branched-chain amino acid transport system permease protein
04302015_20_scaffold_803_17
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15281..15391)
DNA (111bp) protein (37aa)
Inner-membrane translocator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z281_9PROT
Inner-membrane translocator {ECO:0000313|EMBL:EKN01043.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
Displaying 17 items

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