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04302015_20_scaffold_159

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Displaying items 1-30 of 49 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_159_1
Komagataeibacter medellinensis, Komagataeibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(68..1549)
DNA (1482bp) protein (494aa)
Putative uncharacterized protein n=1 Tax=Gluconacetobacter xylinus (strain NBRC 3288 / BCRC 11682 / LMG 1693) RepID=G2I064_GLUXN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK84322.1}; TaxID=634177 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Komagataeibacter.;" source="Komagataeibacter medellinensis (strain NBRC 3288 / BCRC 11682 / LMG; 1693 / Kondo 51) (Gluconacetobacter medellinensis).;"
04302015_20_scaffold_159_2
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1627..1914)
DNA (288bp) protein (96aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000370E37F
Uncharacterized protein {ECO:0000313|EMBL:GAN81687.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_159_3
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1986..3980)
DNA (1995bp) protein (665aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1L4_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN81688.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_159_4
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4075..4689)
DNA (615bp) protein (205aa)
Transcriptional regulator, MerR family n=3 Tax=Acidiphilium RepID=A5FV63_ACICJ
MerR family transcriptional regulator
Transcriptional regulator, MerR family {ECO:0000313|EMBL:ABQ29495.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_159_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4695..5003)
DNA (309bp) protein (103aa)
Integration host factor subunit alpha n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z0E6_9PROT
Integration host factor subunit alpha {ECO:0000256|HAMAP-Rule:MF_00380, ECO:0000256|RuleBase:RU004485}; Short=IHF-alpha {ECO:0000256|HAMAP-Rule:MF_00380};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
ihfA; integration host factor alpha subunit; K04764 integration host factor subunit alpha
04302015_20_scaffold_159_6
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5055..6035)
DNA (981bp) protein (327aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; Beta-ketoacyl-ACP synthase III {ECO:0000256|HAMAP-Rule:MF_01815}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
3-oxoacyl-(acyl-carrier-protein) synthase III (EC:2.3.1.41); K00648 3-oxoacyl-[acyl-carrier-protein] synthase III [EC:2.3.1.180]
3-oxoacyl-[acyl-carrier-protein] synthase 3 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z125_9PROT
04302015_20_scaffold_159_7
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6028..7059)
DNA (1032bp) protein (344aa)
Phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054336}; EC=2.3.1.n2 {ECO:0000256|HAMAP-Rule:MF_00019, ECO:0000256|SAAS:SAAS00054327};; Acyl-ACP phosphotransacylase {ECO:0000256|HAMAP-Rule:MF_00019}; Acyl-[acyl-carrier-protein]--phosphate acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; Phosphate-acyl-ACP acyltransferase {ECO:0000256|HAMAP-Rule:MF_00019}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.
putative glycerol-3-phosphate acyltransferase PlsX; K03621 glycerol-3-phosphate acyltransferase PlsX [EC:2.3.1.15]
Phosphate acyltransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YPA8_9PROT
04302015_20_scaffold_159_8
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(7127..7330)
DNA (204bp) protein (68aa)
50S ribosomal protein L32 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZMV7_9PROT
50S ribosomal protein L32 {ECO:0000256|HAMAP-Rule:MF_00340}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
rpmF; 50S ribosomal protein L32; K02911 large subunit ribosomal protein L32
04302015_20_scaffold_159_9
Alcanivorax jadensis, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7474..7881)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Alcanivorax hongdengensis A-11-3 RepID=L0W7V4_9GAMM
Uncharacterized protein {ECO:0000313|EMBL:KGD62604.1}; TaxID=1177181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax jadensis T9.;"
hypothetical protein
04302015_20_scaffold_159_10
Pseudomonas sp. GM49, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8136..8546)
DNA (411bp) protein (137aa)
Putative membrane protein n=1 Tax=Pseudomonas sp. GM49 RepID=J2SXM8_9PSED
Putative membrane protein {ECO:0000313|EMBL:EJM72041.1}; TaxID=1144331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. GM49.;"
04302015_20_scaffold_159_11
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8642..9169)
DNA (528bp) protein (176aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XVN3_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN00635.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_20_scaffold_159_12
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9278..9826
DNA (549bp) protein (183aa)
SmpA/OmlA domain-containing protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z0E1_9PROT
SmpA/OmlA domain-containing protein {ECO:0000313|EMBL:EKN00634.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_20_scaffold_159_13
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9768..11486
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J262_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:GAN78648.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_159_14
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11493..11948
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZMY7_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN00666.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
Predicted acyltransferase
04302015_20_scaffold_159_15
Aurantimonas manganoxydans, Aurantimonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12054..13301
DNA (1248bp) protein (416aa)
ycdT; diguanylate cyclase YcdT (EC:2.7.7.65)
Putative response regulator with GGDEF domain n=1 Tax=Manganese-oxidizing bacterium (strain SI85-9A1) RepID=Q1YEM7_MOBAS
Putative response regulator with GGDEF domain {ECO:0000313|EMBL:EAS48868.1}; TaxID=287752 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Aurantimonadaceae; Aurantimonas.;" source="Manganese-oxidizing bacterium (strain SI85-9A1).;"
04302015_20_scaffold_159_16
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13389..14750
DNA (1362bp) protein (454aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5G0B7_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31299.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_159_17
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14774..15160
DNA (387bp) protein (129aa)
Cytochrome c, class I n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FTZ2_ACICJ
cytochrome c, class I; K08738 cytochrome c
Cytochrome c, class I {ECO:0000313|EMBL:ABQ29074.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_159_18
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15176..16582)
DNA (1407bp) protein (469aa)
hypothetical protein n=1 Tax=Methyloversatilis sp. NVD RepID=UPI000376088F
D-lactate dehydrogenase/oxidoreductase {ECO:0000313|EMBL:GAN78645.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
FAD linked oxidase domain-containing protein
04302015_20_scaffold_159_19
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16659..17933
DNA (1275bp) protein (425aa)
putative iron-containing alcohol dehydrogenase (EC:1.1.1.-)
Iron-containing alcohol dehydrogenase {ECO:0000313|EMBL:EGO95378.1}; EC=1.1.99.24 {ECO:0000313|EMBL:EGO95378.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Iron-containing alcohol dehydrogenase n=2 Tax=Acidiphilium RepID=A5FYE8_ACICJ
04302015_20_scaffold_159_20
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18218..18961)
DNA (744bp) protein (248aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] rbh
Orotate phosphoribosyltransferase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z006_9PROT
04302015_20_scaffold_159_21
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19106..20320
DNA (1215bp) protein (405aa)
isocitrate dehydrogenase (EC:1.1.1.41); K00031 isocitrate dehydrogenase [EC:1.1.1.42]
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
Isocitrate dehydrogenase [NADP] n=3 Tax=Acidiphilium RepID=A5FW07_ACICJ
04302015_20_scaffold_159_22
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20564..22108)
DNA (1545bp) protein (515aa)
RND efflux system, outer membrane lipoprotein, NodT family n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FW05_ACICJ
outer membrane efflux protein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ29787.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_159_23
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22119..23651)
DNA (1533bp) protein (511aa)
Drug resistance transporter, EmrB/QacA subfamily n=2 Tax=Acidiphilium RepID=A5FW04_ACICJ
EmrB/QacA family drug resistance transporter; K03446 MFS transporter, DHA2 family, multidrug resistance protein B
Multidrug resistance protein {ECO:0000313|EMBL:BAJ79983.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_159_24
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23648..24706)
DNA (1059bp) protein (353aa)
Secretion protein HlyD family protein n=3 Tax=Acidiphilium RepID=A5FW03_ACICJ
secretion protein HlyD family protein; K03543 multidrug resistance protein A
Putative multidrug resistance protein EmrK {ECO:0000313|EMBL:KDM67611.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
04302015_20_scaffold_159_25
Acetobacter cibinongensis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24776..25351
DNA (576bp) protein (192aa)
Transcriptional regulator TetR n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VE32_9PROT
Transcriptional regulator TetR {ECO:0000313|EMBL:GAN61717.1}; TaxID=1231339 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter cibinongensis 4H-1.;"
tetR; transcriptional regulator TetR
04302015_20_scaffold_159_26
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25591..26226
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z013_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN00529.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_159_27
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26207..26926)
DNA (720bp) protein (240aa)
glycerophosphoryl diester phosphodiesterase; K01126 glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]
Glycerophosphoryl diester phosphodiesterase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YHX6_9PROT
Glycerophosphoryl diester phosphodiesterase {ECO:0000313|EMBL:EKM98506.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_159_28
Bradyrhizobium elkanii, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26919..27569)
DNA (651bp) protein (217aa)
fucA; L-fuculose phosphate aldolase (EC:4.1.2.17); K01628 L-fuculose-phosphate aldolase [EC:4.1.2.17]
Putative l-fuculose phosphate aldolase protein n=1 Tax=Fulvimarina pelagi HTCC2506 RepID=Q0FXG5_9RHIZ
Bradyrhizobium elkanii strain UASWS1015 Contig186, whole genome shotgun sequence {ECO:0000313|EMBL:KIU44199.1}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;"
04302015_20_scaffold_159_29
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27643..29751
DNA (2109bp) protein (703aa)
3-hydroxyacyl-CoA dehydrogenase, NAD-binding {ECO:0000313|EMBL:EGO95540.1}; EC=1.1.1.35 {ECO:0000313|EMBL:EGO95540.1};; EC=4.2.1.17 {ECO:0000313|EMBL:EGO95540.1};; EC=5.3.3.8 {ECO:0000313|EMBL:EGO95540.1};; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
NAD-binding 3-hydroxyacyl-CoA dehydrogenase; K07516 3-hydroxyacyl-CoA dehydrogenase [EC:1.1.1.35]
3-hydroxyacyl-CoA dehydrogenase, NAD-binding n=1 Tax=Acidiphilium sp. PM RepID=F7S5N6_9PROT
04302015_20_scaffold_159_30
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29748..31427
DNA (1680bp) protein (560aa)
Long-chain-fatty-acid--CoA ligase LcfA {ECO:0000313|EMBL:KDM66375.1}; EC=6.2.1.3 {ECO:0000313|EMBL:KDM66375.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
AMP-dependent synthetase and ligase; K01897 long-chain acyl-CoA synthetase [EC:6.2.1.3]
AMP-dependent synthetase and ligase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FV50_ACICJ
Displaying items 1-30 of 49 in total

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