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04302015_20_scaffold_218

Search features with annotation key words

Displaying items 1-30 of 61 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_218_1
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..945
DNA (945bp) protein (315aa)
Phosphoesterase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FWW8_ACICJ
putative hydrolase
Phosphoesterase {ECO:0000313|EMBL:ABQ30100.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_218_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1039..2832)
DNA (1794bp) protein (598aa)
ABC transporter-like protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YRG3_9PROT
ABC transporter-like protein {ECO:0000313|EMBL:EKN01402.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
ABC transporter ATP-binding protein; K15738 ATP-binding cassette, subfamily F, uup
04302015_20_scaffold_218_3
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2942..3523
DNA (582bp) protein (194aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G0C7_ACICJ
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding protein {ECO:0000313|EMBL:ABQ31309.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_218_4
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4105..5328
DNA (1224bp) protein (408aa)
Phage integrase family protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0J109_ACIMA
phage integrase family protein
Phage integrase family protein {ECO:0000313|EMBL:BAJ79391.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_218_5
unknown

Not on your lists

5426..6289
DNA (864bp) protein (288aa)

This feature has no annotations

04302015_20_scaffold_218_6
unknown

Not on your lists

6374..6574
DNA (201bp) protein (67aa)

This feature has no annotations

04302015_20_scaffold_218_7
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6684..7448
DNA (765bp) protein (255aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S210_9PROT
DNA recombinase RecA {ECO:0000313|EMBL:GAN79025.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
DNA recombinase
04302015_20_scaffold_218_8
Desulfovibrio fructosivorans, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7451..8473
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Desulfovibrio fructosivorans JJ RepID=E1JSZ7_DESFR
Uncharacterized protein {ECO:0000313|EMBL:EFL52630.1}; TaxID=596151 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Desulfovibrio fructosivorans JJ.;"
hypothetical protein; K06919 putative DNA primase/helicase
04302015_20_scaffold_218_9
Acidiphilium sp. PM, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8466..8981
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Acidiphilium sp. PM RepID=F7S415_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EGO96112.1}; TaxID=1043206 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. PM.;"
04302015_20_scaffold_218_10
Burkholderia sp. MSHR3999, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9063..13982
DNA (4920bp) protein (1640aa)
DNA damage-inducible protein n=1 Tax=Desulfovibrio longus RepID=UPI0003B70D62 rbh
KY49.ctg7180000000014_quiver, whole genome shotgun sequence {ECO:0000313|EMBL:KIP19790.1}; TaxID=1542965 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MSHR3999.;"
helicase domain-containing protein
04302015_20_scaffold_218_11
Chlorobium limicola, Chlorobium, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(13991..14293)
DNA (303bp) protein (101aa)
Transcriptional regulator, XRE family n=1 Tax=Chlorobium limicola (strain DSM 245 / NBRC 103803) RepID=B3EG51_CHLL2
XRE family transcriptional regulator; K07726 putative transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ACD91060.1}; TaxID=290315 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chlorobium/Pelodictyon group; Chlorobium.;" source="Chlorobium limicola (strain DSM 245 / NBRC 103803).;"
04302015_20_scaffold_218_12
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14277..14639)
DNA (363bp) protein (121aa)
Putative uncharacterized protein n=1 Tax=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) RepID=B4SC20_PELPB
RelE cytotoxic translational repressor of toxin-antitoxin stability system {ECO:0000313|EMBL:ETX08095.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
hypothetical protein
04302015_20_scaffold_218_13
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15291..16661
DNA (1371bp) protein (457aa)
hypothetical protein; K00285 D-amino-acid dehydrogenase [EC:1.4.99.1] rbh
hypothetical protein n=1 Tax=Hoeflea sp. 108 RepID=UPI0003642FC9
Uncharacterized protein {ECO:0000313|EMBL:BAL09419.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium japonicum USDA 6.;"
04302015_20_scaffold_218_14
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16740..17648
DNA (909bp) protein (303aa)
Inner-membrane translocator n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z281_9PROT rbh
Inner-membrane translocator {ECO:0000313|EMBL:EKN01043.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein
04302015_20_scaffold_218_15
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17652..18932
DNA (1281bp) protein (427aa)
High-affinity branched-chain amino acid transport system permease protein LivM (LIV-I protein M) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YQE3_9PROT
High-affinity branched-chain amino acid transport system permease protein LivM (LIV-I protein M) {ECO:0000313|EMBL:EKN01042.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein
04302015_20_scaffold_218_16
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18925..19776
DNA (852bp) protein (284aa)
ABC transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZP36_9PROT
ABC transporter {ECO:0000313|EMBL:EKN01041.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein
04302015_20_scaffold_218_17
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19773..20492
DNA (720bp) protein (240aa)
ABC transporter ATP-binding protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XWS7_9PROT rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EKN01040.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein
04302015_20_scaffold_218_18
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20562..21680
DNA (1119bp) protein (373aa)
Extracellular ligand-binding receptor n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1K2_9PROT
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EKN01039.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
extracellular ligand-binding receptor
04302015_20_scaffold_218_19
unknown

Not on your lists

comp(21876..22112)
DNA (237bp) protein (79aa)

This feature has no annotations

04302015_20_scaffold_218_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22377..24581
DNA (2205bp) protein (735aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G1U6_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ31828.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_218_21
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24615..25244
DNA (630bp) protein (210aa)
DNA-3-methyladenine glycosylase II (EC:3.2.2.21); K01247 DNA-3-methyladenine glycosylase II [EC:3.2.2.21]
DNA-3-methyladenine glycosylase II {ECO:0000313|EMBL:KDM66178.1}; EC=3.2.2.21 {ECO:0000313|EMBL:KDM66178.1};; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
DNA-3-methyladenine glycosylase II n=2 Tax=Acidiphilium RepID=F0J4W1_ACIMA
04302015_20_scaffold_218_22
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25220..26395)
DNA (1176bp) protein (392aa)
Major facilitator transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZPA1_9PROT
Major facilitator transporter {ECO:0000313|EMBL:EKN01076.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
putative major facilitator superfamily transporter
04302015_20_scaffold_218_23
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26479..27315
DNA (837bp) protein (279aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27); K06153 undecaprenyl-diphosphatase [EC:3.6.1.27]
Undecaprenyl-diphosphatase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XWZ9_9PROT
04302015_20_scaffold_218_24
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27317..28063
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1R2_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN80663.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_218_25
Acetobacter tropicalis, Acetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28029..28667)
DNA (639bp) protein (213aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123176};; TaxID=104102 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acetobacter.;" source="Acetobacter tropicalis.;"
phosphoribosylanthranilate isomerase (EC:5.3.1.24); K01817 phosphoribosylanthranilate isomerase [EC:5.3.1.24]
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Acetobacter tropicalis NBRC 101654 RepID=F7VGY8_9PROT
04302015_20_scaffold_218_26
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28664..29359)
DNA (696bp) protein (232aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
pyrF; orotidine 5'-phosphate decarboxylase (EC:4.1.1.23); K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23]
Orotidine 5'-phosphate decarboxylase n=2 Tax=Acidiphilium RepID=F0IZA4_ACIMA
04302015_20_scaffold_218_27
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29356..29604)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IZA3_ACIMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAJ81113.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_218_28
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29637..29957)
DNA (321bp) protein (107aa)
Integration host factor subunit beta n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XUB0_9PROT
Integration host factor subunit beta {ECO:0000256|HAMAP-Rule:MF_00381, ECO:0000256|RuleBase:RU003941}; Short=IHF-beta {ECO:0000256|HAMAP-Rule:MF_00381};; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
integration host factor subunit beta; K05788 integration host factor subunit beta
04302015_20_scaffold_218_29
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30103..31836)
DNA (1734bp) protein (578aa)
30S ribosomal protein S1 n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZIC9_9PROT
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
rpsA; 30S ribosomal protein S1; K02945 small subunit ribosomal protein S1
04302015_20_scaffold_218_30
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32066..32929
DNA (864bp) protein (288aa)
Putative lipoprotein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YK33_9PROT
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative lipoprotein; K05807 putative lipoprotein
Displaying items 1-30 of 61 in total

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