ggKbase home page

04302015_20_scaffold_230

Search features with annotation key words

Displaying items 1-30 of 35 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
04302015_20_scaffold_230_1
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19..894)
DNA (876bp) protein (292aa)
atpG; ATP synthase subunit gamma (EC:3.6.3.14); K02115 F-type H+-transporting ATPase subunit gamma [EC:3.6.3.14]
ATP synthase gamma chain n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XWZ4_9PROT
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
04302015_20_scaffold_230_2
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(898..2289)
DNA (1392bp) protein (464aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
atpA; ATP synthase subunit alpha (EC:3.6.3.14); K02111 F-type H+-transporting ATPase subunit alpha [EC:3.6.3.14]
ATP synthase subunit alpha n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z1Q6_9PROT
04302015_20_scaffold_230_3
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2366..2920)
DNA (555bp) protein (185aa)
ATP synthase F1 subunit delta (EC:3.6.3.14); K02113 F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]
ATP synthase subunit delta n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z2E5_9PROT
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
04302015_20_scaffold_230_4
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3099..3725)
DNA (627bp) protein (209aa)
Uncharacterized protein n=2 Tax=Acidiphilium RepID=F0J3F5_ACIMA
Uncharacterized protein {ECO:0000313|EMBL:KDM65427.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
hypothetical protein
04302015_20_scaffold_230_5
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3753..5204
DNA (1452bp) protein (484aa)
Major facilitator superfamily MFS_1 n=3 Tax=Acidiphilium RepID=A5G198_ACICJ
ABC transporter multidrug permease {ECO:0000313|EMBL:GAN80904.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
major facilitator transporter
04302015_20_scaffold_230_6
Acidisphaera rubrifaciens, Acidisphaera, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5205..5675
DNA (471bp) protein (157aa)
Putative uncharacterized protein n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QFJ1_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:GAN77993.1}; TaxID=1231350 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidisphaera.;" source="Acidisphaera rubrifaciens HS-AP3.;"
hypothetical protein; K09958 hypothetical protein
04302015_20_scaffold_230_7
Thiomonas intermedia, Thiomonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5726..6229
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Thiomonas intermedia (strain K12) RepID=D5X548_THIK1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADG29872.1}; Flags: Precursor;; TaxID=75379 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Thiomonas.;" source="Thiomonas intermedia (strain K12) (Thiobacillus intermedius).;"
04302015_20_scaffold_230_8
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6243..6821)
DNA (579bp) protein (193aa)
guanylate kinase (EC:2.7.4.8); K00942 guanylate kinase [EC:2.7.4.8]
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_00328}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Guanylate kinase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5FYH4_ACICJ
04302015_20_scaffold_230_9
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6814..7716)
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z0V5_9PROT
Uncharacterized protein {ECO:0000313|EMBL:EKN00568.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_20_scaffold_230_10
Acetobacteraceae bacterium AT-5844, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7755..8522
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00036D4927
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EHM03310.1}; TaxID=1054213 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; unclassified Acetobacteraceae.;" source="Acetobacteraceae bacterium AT-5844.;"
dehydrogenase
04302015_20_scaffold_230_11
Caulobacter segnis, Caulobacter, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8699..10486
DNA (1788bp) protein (596aa)
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor n=1 Tax=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) RepID=D5VLS8_CAUST rbh
methyl-accepting chemotaxis sensory transducer rbh
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor {ECO:0000313|EMBL:ADG11451.1}; TaxID=509190 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Caulobacter.;" source="Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC; 15250 / LMG 17158 / TK0059) (Mycoplana segnis).;"
04302015_20_scaffold_230_12
Sideroxydans lithotrophicus, Sideroxydans, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10655..11668)
DNA (1014bp) protein (338aa)
Putative uncharacterized protein n=1 Tax=Sideroxydans lithotrophicus (strain ES-1) RepID=D5CUQ7_SIDLE
hypothetical protein; K09824 hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE12444.1}; TaxID=580332 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Sideroxydans.;" source="Sideroxydans lithotrophicus (strain ES-1).;"
04302015_20_scaffold_230_13
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11828..12433)
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G2X2_ACICJ
Uncharacterized protein {ECO:0000313|EMBL:GAN79872.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
04302015_20_scaffold_230_14
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12433..13425)
DNA (993bp) protein (331aa)
Mammalian cell entry related domain protein n=3 Tax=Acidiphilium RepID=A5G2X3_ACICJ
hypothetical protein; K02067 putative ABC transport system substrate-binding protein
Mammalian cell entry related domain protein {ECO:0000313|EMBL:ABQ32205.1}; Flags: Precursor;; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_230_15
Acidiphilium multivorum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13425..14159)
DNA (735bp) protein (245aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / AIU301) RepID=F0IXE2_ACIMA
putative ABC transporter ATP-binding protein; K02065 putative ABC transport system ATP-binding protein
Putative ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAJ82707.1}; TaxID=926570 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium multivorum (strain DSM 11245 / JCM 8867 / NBRC 100883 /; AIU301).;"
04302015_20_scaffold_230_16
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14159..15262)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=A5G2X5_ACICJ
hypothetical protein; K02066 putative ABC transport system permease protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ32207.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_230_17
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15259..15864)
DNA (606bp) protein (202aa)
TerC family integral membrane protein n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5XVI5_9PROT
TerC family integral membrane protein {ECO:0000313|EMBL:EKN00585.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
TerC family integral membrane protein
04302015_20_scaffold_230_18
Granulibacter bethesdensis, Granulibacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15959..17290
DNA (1332bp) protein (444aa)
adenylosuccinate lyase (EC:4.3.2.2); K01756 adenylosuccinate lyase [EC:4.3.2.2] rbh
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID=391165 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Granulibacter.;" source="Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1).;"
Adenylosuccinate lyase n=1 Tax=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) RepID=Q0BRJ6_GRABC rbh
04302015_20_scaffold_230_19
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17301..17999
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Gluconacetobacter europaeus RepID=UPI000237EB44
Uncharacterized protein {ECO:0000313|EMBL:EKN00608.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
hypothetical protein
04302015_20_scaffold_230_20
Acidiphilium cryptum, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18104..18589)
DNA (486bp) protein (162aa)
Uncharacterized protein n=3 Tax=Acidiphilium RepID=A5FWT3_ACICJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABQ30065.1}; TaxID=349163 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium cryptum (strain JF-5).;"
04302015_20_scaffold_230_21
Acidocella sp. MX-AZ02, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18639..19376)
DNA (738bp) protein (246aa)
Gamma-glutamyl-gamma-aminobutyrate hydrolase n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5Z0Z0_9PROT rbh
Gamma-glutamyl-gamma-aminobutyrate hydrolase {ECO:0000313|EMBL:EKN00603.1}; TaxID=1214225 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella sp. MX-AZ02.;"
peptidase C26; K07010 putative glutamine amidotransferase
04302015_20_scaffold_230_22
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19379..20581)
DNA (1203bp) protein (401aa)
Putative drug resistance transporter n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YP77_9PROT
Multidrug resistance efflux pump Bcr/CflA {ECO:0000313|EMBL:GAN79325.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
putative drug resistance transporter; K07552 MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein
04302015_20_scaffold_230_23
Candidatus Regiella insecticola, Candidatus Regiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20655..21053)
DNA (399bp) protein (133aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Toxin VapC {ECO:0000256|HAMAP-Rule:MF_00265}; TaxID=663321 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; aphid secondary symbionts; Candidatus Regiella.;" source="Candidatus Regiella insecticola LSR1.;"
hypothetical protein n=1 Tax=Rhodocyclaceae bacterium RZ94 RepID=UPI00036A7DC8
pilT2; hypothetical protein
04302015_20_scaffold_230_24

Not on your lists

comp(21050..21283)
DNA (234bp) protein (78aa)
Prevent-host-death protein n=1 Tax=Mesorhizobium sp. LSHC420B00 RepID=V7FG51_9RHIZ
Uncharacterized protein {ECO:0000313|EMBL:KKM67980.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
04302015_20_scaffold_230_25
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21432..23792)
DNA (2361bp) protein (787aa)
DNA translocase FtsK n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5ZMR6_9PROT
Cell division DNA translocase FtsK {ECO:0000313|EMBL:GAN79313.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
ftsK; DNA translocase FtsK; K03466 DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family
04302015_20_scaffold_230_26
Methylobacterium aquaticum, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23902..24390)
DNA (489bp) protein (163aa)
Thioesterase superfamily protein n=1 Tax=Methylobacterium nodulans (strain ORS2060 / LMG 21967) RepID=B8IPQ2_METNO
PaaI protein {ECO:0000313|EMBL:BAQ47220.1}; TaxID=270351 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacterium aquaticum.;"
thioesterase superfamily protein
04302015_20_scaffold_230_27
Polymorphum gilvum, Polymorphum, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24394..25065)
DNA (672bp) protein (224aa)
Nitroreductase family n=1 Tax=Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1) RepID=F2J1H2_POLGS
nitroreductase family
Nitroreductase family {ECO:0000313|EMBL:ADZ69754.1}; TaxID=991905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Polymorphum.;" source="Polymorphum gilvum (strain LMG 25793 / CGMCC 1.9160 / SL003B-26A1).;"
04302015_20_scaffold_230_28
Acidiphilium sp. JA12-A1, Acidiphilium, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25078..25704)
DNA (627bp) protein (209aa)
cmk; cytidylate kinase (EC:2.7.4.14); K00945 cytidylate kinase [EC:2.7.4.14]
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;"
Cytidylate kinase n=1 Tax=Acidiphilium cryptum (strain JF-5) RepID=KCY_ACICJ
04302015_20_scaffold_230_29
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25701..27083)
DNA (1383bp) protein (461aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00210}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
3-phosphoshikimate 1-carboxyvinyltransferase; K00800 3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]
3-phosphoshikimate 1-carboxyvinyltransferase n=2 Tax=Acidiphilium RepID=AROA_ACICJ
04302015_20_scaffold_230_30
Acidocella aminolytica, Acidocella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27131..27460
DNA (330bp) protein (110aa)
Uncharacterized protein (Fragment) n=1 Tax=Acidocella sp. MX-AZ02 RepID=K5YYQ0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:GAN81188.1}; TaxID=1120923 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidocella.;" source="Acidocella aminolytica 101 = DSM 11237.;"
hypothetical protein
Displaying items 1-30 of 35 in total

View Taxonomy